Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1360 ATGGATTTCACTCCGCCGCCGATCGAGGACGGTTTCACCGCCGAGAAACTCTTCACGCAGGGCTTCTCCTACACATACGATGACGTCATCTTTCTCCCCCACTACATCGACTTCGCTGCCGACGTCGTGGACCTCTCCACGCGCCTCACGCGCCGCCTTCCCCTTGCCGTGCCGTTTGTTGCCTCTCCGATGGACACCGTGTCGGAGTCCGCCATGGCCTCCGCCATGGCCTCCCTCGGCGGCATCGCCGTCGTCCACTCCAACGTCCCCGCCGCCGTCCAGGCGGCCATCCTCCGCAAAGCGAAGTCCCGCCGCGTCCCCATCCTCTCCGACCCCGCCTTCGCCGCACCTTCCGCCGTCGTGGAGCACGATGACGCCTTCGGGGCCTCCCCCTTCCTTCTCGTCACCGACACTGGCACCTCCGCCGGGAAACTCCTCGGCTACGTCGCGAAGAGTGACTGGACGAATCATACCGACAAGGGCTTGAGAGTCGGCGACTACATGGCGCCGCCTCCCAAGCCAGTGCCATGGAACGCCGACCTAAACAAAATTAATGAAATATTTGAGAGTGAGAAAAGTGGTGCTGTGGCTTTGGAGAAGGATGGTGAGGTTGTTGATTTGGTGGTGAGGGAGGAGGTGGAGAGGGTGAAGGGTTACCCGAAACTGGTGGCGCCGGCGACGGTGGGGGCGGACGGGGAGTTTATGGTGGGGGCCGCGGTGGGGACGAGGGAAGATGATAAGGAGAGGTTGGAGCATTTGGTGAAGGCTGGGTTGAATGTTGTAGTGTTGGATAGTTCTCAGGGGAACTCAATTTATCAGTTAGAGATGGTGAAGTATGTGAAGAGGGTTTACCCTGAGCTTGATGTGATTGGGGGGAATGTTGTGACTATGTACCAGGCTGAGAATCTGATTCAGGCTGGGGTTGATGGGTTGAGGGTTGGAATGGGGTCTGGGTCCATTTGTACTACTCAGGAGGTTTGTGCTGTGGGGCGTGGTCAGGCAACTGCTGTTTACAAGGTCTCGTCCATTGCTTATAAAAGTGGTGTTCCTGTGATTGCTGATGGTGGCATCTCAAACTCTGGTCATATTGTTAAGGCTTTGTCATTGGGAGCGTCAACTGTTATGATGGGAAGCTTCTTAGCTGGTAGTCTTGAGGCTCCTGGGGCTTATGTGTATCAGAATGGTCAACGTGTGAAAAAGTACAGAGGAATGGGTTCCCTAGAAGCCATGACTAAAGGGAGCGATGCAAGGTACTTGGGTGATACAGCAAAGCTAAAAATTGCTCAGGGGGTTGTTGGAGCTGTTAAAGATAAGGGCTCTGTCTTGAATTTCATACCATACACCTTGCAAGCAGTCAGGCAAGGGTTTCAGGATATCGGTGCCAACTCTCTACAGTCTGCTCATGACCTTCTAAGATCCAGGGTGTTAAGACTGGAGGTCCGGAGTGGAGCAGCACAAGTTGAAGGTGGAATTCATGGGCTGGTTTCTTATGAAAAGAAATACTTTTGA 1509 0.5447 MDFTPPPIEDGFTAEKLFTQGFSYTYDDVIFLPHYIDFAADVVDLSTRLTRRLPLAVPFVASPMDTVSESAMASAMASLGGIAVVHSNVPAAVQAAILRKAKSRRVPILSDPAFAAPSAVVEHDDAFGASPFLLVTDTGTSAGKLLGYVAKSDWTNHTDKGLRVGDYMAPPPKPVPWNADLNKINEIFESEKSGAVALEKDGEVVDLVVREEVERVKGYPKLVAPATVGADGEFMVGAAVGTREDDKERLEHLVKAGLNVVVLDSSQGNSIYQLEMVKYVKRVYPELDVIGGNVVTMYQAENLIQAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAYKSGVPVIADGGISNSGHIVKALSLGASTVMMGSFLAGSLEAPGAYVYQNGQRVKKYRGMGSLEAMTKGSDARYLGDTAKLKIAQGVVGAVKDKGSVLNFIPYTLQAVRQGFQDIGANSLQSAHDLLRSRVLRLEVRSGAAQVEGGIHGLVSYEKKYF* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1360 502 SUPERFAMILY CBS-domain pair 132 215 IPR046342 -
Gso8g1360 502 SMART IMPDH_2 22 492 - -
Gso8g1360 502 Gene3D Aldolase class I 11 502 IPR013785 -
Gso8g1360 502 CDD CBS_pair_IMPDH 110 210 - -
Gso8g1360 502 Pfam IMP dehydrogenase / GMP reductase domain 24 492 IPR001093 GO:0003824
Gso8g1360 502 SUPERFAMILY Inosine monophosphate dehydrogenase (IMPDH) 12 501 - -
Gso8g1360 502 Hamap Inosine-5'-monophosphate dehydrogenase [guaB]. 23 500 IPR005990 GO:0003938|GO:0006164
Gso8g1360 502 ProSitePatterns IMP dehydrogenase / GMP reductase signature. 311 323 IPR015875 GO:0016491
Gso8g1360 502 PANTHER INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE 1 7 502 - -
Gso8g1360 502 CDD IMPDH 23 472 IPR001093 GO:0003824
Gso8g1360 502 PANTHER INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED 7 502 IPR005990 GO:0003938|GO:0006164
Gso8g1360 502 TIGRFAM IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 23 468 IPR005990 GO:0003938|GO:0006164
Gso8g1360 502 PIRSF IMPDH 11 502 IPR005990 GO:0003938|GO:0006164
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1360 Gso-Chr8 13008787 13012708 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1360 K00088 - gmx:547628 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1360 8 13008787 13012708 Gso8g1360 8 13008787 13012708 ECH
Gso8g1360 8 13008787 13012708 Gso15g2165 15 49755301 49759489 GST