Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1356 ATGGCCGCACTGAACCTTTGCCGCATGGCACTTCGATCCTCGAAACTTCTCTATCGCCCTTATAATCTTCTCTCCGTTCAGTTGCAGATGCAGATGCAACCCTCTTCTCCTCCCCTCACTCGAAAGATGAGCACGGATGCGCAGAGTATTGCTTCCCAGCTTAATAGTTCTGGATTGTTGAGGACTCAGGGCCTTATTGCAGGGAAATGGAGTGATGCTTATGATGGTAAAACCATAAAGGTTTATAATCCAGCAACTGGTGAATCTGTTGTAGATGTTGCATGCATGGGTGGAAGAGAGACAAACGATGCAATTTCTGCAGCCTATGATGCATATGGATCTTGGAGCAAAACCACTGCTGCTGAACGAAGCAAATTACTGAGGAAATGGTATGATTTGCTAATGGTACATAAAGAAGAACTTGCACAGCTTATAACCTTGGAGCAGGGGAAACCTCTTAAAGAGTCTGTGGGTGAGATAGTCTATGGGGCTGGCTTTATTGAGTTTGCAGCTGAGGAGGCAAAACGTATATATGGGGATATAGTTCCTGCACCTTTTTCTGATCGGCGATTATTTGTTCTAAAGCAGCCTGTAGGGGTTGTAGGTGCAATTACACCTTGGAACTTTCCCCTTGCTATGATTACTCGAAAGGTTGGTCCAGCCCTTGCATGTGGCTGTACAGTGGTCATAAAGCCCTCTGAACTTACACCTCTCACTGCTTTAGCTGCAGTGGAACTCTCCATTCAAGCTGGAATACCACCGGGTGTCGTGAACGTGGTAATGGGAAATGCTCCTGATATTGGGGACGCTTTACTTGCAAGTCCACAGGTAAGGAAGATCACATTCACAGGCTCGACAGCAGTTGGGAAGAAATTGATGGCTGGTTCAGCTGAAACAGTTAAAAAAGTATCTCTTGAACTCGGTGGCAATGCACCTTGCATAGTTTTTGATGATGCTGACCTGGATGTTGCAGTAAAAGGAACTCTTGCAGCAAAGTTCCGTAACAGTGGACAAACATGTGTTTGTGCAAATAGAATTATTGTGCAAGAAGGTATATATGAGAAGTTTGCAAATGCTTTACGTGATGCTGTTCAGAATATGAAAGTTGGGGATGGTTTTAGTGAAGGTGTGTCACAGGGTCCTCTAATAAATGAAGCTGCTGTAAAAAAGGTTGAGTCCTTAATTCATGATGCTACATCGAAGGGAGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGACTTACTTTTTATGAACCCACAGTCATCAGTGATGTCAACAGTGATATGCACATATCAAGAGAGGAAGCATTTGGACCTGTTGCACCCCTTTTGAGATTCAAAACTGAAGAGGAAGCTATCAGAATTGCTAATGACACTAACGCAGGTTTGGGTTCATATGTATTTACAAACAGTATCCAACGATCATGGCGTGTTGCTGAGGCTCTTGAATATGGACTAGTGGGTGTTAATGAAGGAGTAATTTCAACTGAGGTGGCTCCATTTGGTGGTTTTAAACAGTCTGGCCTTGGAAGAGAAGGCTCCAAATATGGGATGGATGAATATTTAGAGATCAAGTATGTGTGCTTCGGAAACATGAACAAAGAATGA 1614 0.4349 MAALNLCRMALRSSKLLYRPYNLLSVQLQMQMQPSSPPLTRKMSTDAQSIASQLNSSGLLRTQGLIAGKWSDAYDGKTIKVYNPATGESVVDVACMGGRETNDAISAAYDAYGSWSKTTAAERSKLLRKWYDLLMVHKEELAQLITLEQGKPLKESVGEIVYGAGFIEFAAEEAKRIYGDIVPAPFSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAVELSIQAGIPPGVVNVVMGNAPDIGDALLASPQVRKITFTGSTAVGKKLMAGSAETVKKVSLELGGNAPCIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRIIVQEGIYEKFANALRDAVQNMKVGDGFSEGVSQGPLINEAAVKKVESLIHDATSKGAKVILGGKRHSLGLTFYEPTVISDVNSDMHISREEAFGPVAPLLRFKTEEEAIRIANDTNAGLGSYVFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGFKQSGLGREGSKYGMDEYLEIKYVCFGNMNKE* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1356 537 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 57 534 - -
Gso8g1356 537 CDD ALDH_F5_SSADH_GabD 81 531 - -
Gso8g1356 537 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 333 344 IPR016160 GO:0016491
Gso8g1356 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 76 523 IPR016162 GO:0016491
Gso8g1356 537 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 305 312 IPR029510 GO:0016491
Gso8g1356 537 Pfam Aldehyde dehydrogenase family 72 529 IPR015590 GO:0016491
Gso8g1356 537 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 57 534 - -
Gso8g1356 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 309 498 IPR016163 GO:0016620
Gso8g1356 537 SUPERFAMILY ALDH-like 58 535 IPR016161 GO:0016491
Gso8g1356 537 TIGRFAM SSADH: succinate-semialdehyde dehydrogenase 81 527 IPR010102 GO:0009013|GO:0009450
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1356 Gso-Chr8 12969757 12982322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1356 41 537 Aldehyde Dehydrogenase Gene Family AT1G79440 78.873 0.0 817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1356 8 12969757 12982322 Gso8g1356 8 12969757 12982322 ECH