Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1343 ATGGCTGCTCAATTGCAAAAATCTGCAGATGAAATGAGGAAGAAGCTTCATGGTGATTCTTCAACGGTTGAACTCAATAATTCCAATTCGGTTCCTTCCAAGGGTGCAAGTTCCCCTTCTGATGCAAGATCATGTGTATCATCCATAGGGGATGCTTCTGGTAGTGTTAAGGAAGTTGATGTGGATCATGAGTACTTGTCCACAGATCAGGGCGTTCCTTATCCTGCCGGCGGCTATTACGGTTACTACTATCCAGGTTATGGTGGTTTCTATGGAGAGTCAGACAACCAAGGGTACTATGTTGGTGCCGATGCCGTGGATCTTCAGTACCCTGTCATGCAAGCAGATAATGGTTCTTATGTCTATCTCGTGCCAGGATTTCAGACTGGCTACCCTTCATACTATCATCCTCTAAGTCCAGCTGGTATTGAAGGACAGTATGTTGGCCATAACGTCTACCCCCCTGGCTCCATCTATCAACAACCGATTGGATCGCCTGGTTATTATCCAGCTTCTCTATCATATGGAGAGTTACAGCCAACAACATACTCGTGGGATTCACCTCTAATCAATCAAGATGGGTTACAAGGACATGGTTATAATGAACTGGCTGGTAAACCAAATGGTAGATCCAATTTGTCTTCCCAGAGTCATACTAGTGGTGTTGTGTCAAAGTCTGCACCCCCACCTAACTCGGCAGAAGGGAAGGGTTTGACATCATTATTAGAGGTCTCATCAACTCATGTTAAGCATAACCAGCCAAAACAAACAAACAAGGCACCAGTTTCGGTCCTCCATTCACCTGTTGCAAAGTTTCCCGCATACAATCAAGGAAAGAGCGGATTCCTCTATCCAAACAACTTGCTTAATGTGAAAGCAAACACAAAGGGCTGGGTTAGTACTGAAAAGTTGAAACAGAGAAACAAGGTCAACGATTCACTCAATGAGCAGAATCAAGGTCCTAGAACAGCTAATGCAAAAGGTGCATTAATGTCTGGAGGTAATTCTGTGAGAGGCTCAGCCCCAGGTGGGAGTGGAAATGTTACCAACAAAATCAGGACAGATCAGTACAACCTTCCTGATTTTCCAACCAAATATGATCATGCACTTTTCTTTGTCATCAAATCTTACAGTGAAGATGATATCCACAAGAGCATCAAGTACAACGTGTGGGCGAGTACTCCTAATGGGAATAAGAGGCTGGATGGTGCATTTCAGGATGCACAGAAGAGAATGGAAGAGAAAGGATGCAAGTGCCCTGTGTTCCTTTTCTTTTCGGTCAATGCTAGTGGTCAATTTTGCGGAGTAGCTGAGATGACTGGACGAGTTGATTTCAACAAAAGTATGGATTTCTGGCAACAGGATAAGTGGAATGGATATTTCTCTGTCAAATGGCACATTATAAAGGATGTTCCAAATCCTCAACTACGCCACATAATACTCGAGAATAATGATCACAAGCCTGTCACAAATAGTAGAGACACACAAGAGGTGAGTTTTCCCCAAGGTGTTGAAATGCTTAACATTTTCAAGAATTATGTGGCAAGAACTTCCATATTGGATGACTTTGAATTTTACGAAAGCCGCCAGAAGGTATTGCAGGAGAAGAAAACAAGGCAATCTATGCCCCATACCAGTGTACAGCAAATAGAGGAATTAACCACTACACTTGGGTCAGTAGACCTATCATCTGTGAAGAACATGGAGGATCCTAAGGTGGTTGAGAGAGTGAATGACTGA 1740 0.4328 MAAQLQKSADEMRKKLHGDSSTVELNNSNSVPSKGASSPSDARSCVSSIGDASGSVKEVDVDHEYLSTDQGVPYPAGGYYGYYYPGYGGFYGESDNQGYYVGADAVDLQYPVMQADNGSYVYLVPGFQTGYPSYYHPLSPAGIEGQYVGHNVYPPGSIYQQPIGSPGYYPASLSYGELQPTTYSWDSPLINQDGLQGHGYNELAGKPNGRSNLSSQSHTSGVVSKSAPPPNSAEGKGLTSLLEVSSTHVKHNQPKQTNKAPVSVLHSPVAKFPAYNQGKSGFLYPNNLLNVKANTKGWVSTEKLKQRNKVNDSLNEQNQGPRTANAKGALMSGGNSVRGSAPGGSGNVTNKIRTDQYNLPDFPTKYDHALFFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDGAFQDAQKRMEEKGCKCPVFLFFSVNASGQFCGVAEMTGRVDFNKSMDFWQQDKWNGYFSVKWHIIKDVPNPQLRHIILENNDHKPVTNSRDTQEVSFPQGVEMLNIFKNYVARTSILDDFEFYESRQKVLQEKKTRQSMPHTSVQQIEELTTTLGSVDLSSVKNMEDPKVVERVND* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1343 579 Gene3D ph1033 like domains 346 525 - -
Gso8g1343 579 MobiDBLite consensus disorder prediction 196 237 - -
Gso8g1343 579 Pfam YT521-B-like domain 371 511 IPR007275 GO:0003723
Gso8g1343 579 MobiDBLite consensus disorder prediction 311 325 - -
Gso8g1343 579 ProSiteProfiles YTH domain profile. 369 510 IPR007275 GO:0003723
Gso8g1343 579 MobiDBLite consensus disorder prediction 1 49 - -
Gso8g1343 579 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 4 545 IPR045168 -
Gso8g1343 579 PANTHER OS01G0679900 PROTEIN 4 545 - -
Gso8g1343 579 MobiDBLite consensus disorder prediction 306 353 - -
Gso8g1343 579 MobiDBLite consensus disorder prediction 207 227 - -
Gso8g1343 579 MobiDBLite consensus disorder prediction 21 49 - -
Gso8g1343 579 MobiDBLite consensus disorder prediction 338 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1343 Gso-Chr8 12727066 12732010 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1343 K20102 - gmx:100791190 1175.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1343 8 12727066 12732010 Gso8g1343 8 12727066 12732010 ECH
Gso8g1343 8 12727066 12732010 Gso15g2182 15 50150545 50155498 GST