Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1337 ATGGGAACACCTGTGAACATCATCGTTGGATCACAGGTTTGGGTTGAGGATCCTGAGGATGCATGGATTGATGGTGAGGTGACACAAATCAAAGGCAAAAATGCCACCATCATTGCCACAAATGGGAAAACTGTGGTGGCAGAAATTTCAAGCATATACCCCAAAGATACAGAGGCACCACCTGCAGGAGTTGATGACATGACCAAGCTAGCATACCTTCATGAGCCAGGAGTCCTGCATAACCTTGCAACTCGTTTTTCTCTCAATGAGATATATACATATACAGGGAATATCTTAATTGCAGTGAATCCTTTTCGAAGACTGCCGCATTTGTATGACATCCATATGATGGAGCAGTACAAAGGAGCAGCATTTGGAGAGCTTAGTCCTCACCTTTTTGCTGTAGCTGACACATGTTACAGGGCAATGATAAATGAAAATGGAAGCCAATCCATTTTGGTAAGTGGAGAGAGTGGAGCTGGTAAAACTGAGACAACGAAAATGCTCATGAGATATCTAGCATTCATGGGGGGTAGATCTGCTACAGAAGGAAGAACTGTAGAACAACAGGTTTTGGAGTCAAATCCAGTGTTGGAAGCATTTGGAAATGCCAAAACTGTCAAAAACAACAACTCAAGTCGTTTTGGTAAATTTGTTGAAATTCAATTTGACAAGAATGGGAAGATTTCTGGAGCTGCAATCCGTACATATCTCCTCGAAAGATCACGAGTTTGCCAGGTCTCTGATCCAGAGAGAAACTACCATTGCTTTTACATGCTTTGTGCAGCACCACCAGAGGATGTCAAGAAGTACAAGTTAGGGGATCCAAGGCAATTCCACTATCTTAATCAATCAAACTGTTATCAAGTATCGAATGTGGATGATGCAAAAGAATACTTGGAGACCAGAAATGCAATGGATATTGTAGGCATTAGCCAAGAAGAGCAGGATGCGATCTTCCGTGTGGTAGCCGCAATCCTCCATCTTGGAAATGTTGACTTTGTCAAAGGGAAAGAAGTTGATTCTTCCAAATTGAAAGATGATAAATCACTCTTCCACCTCCAAACAGCCGCAGATTTATTCATGTGTGATGCGAAAGCACTGGAAGACTCACTTTGCGAGCGTGTCATTGTAACTCCTGATGGTAACATTACCAAACCTCTTGACCCAGATGCAGCTGCTTTGAGCCGAGATGCCTTGGCAAAGACTGTCTACTCCAAATTGTTTGATTGGATTGTGGACAAGATTAACAGTTCAATTGGTCAAGATTCCAATGCAGTAAGCATAATAGGAGTCCTTGATATTTATGGATTTGAAAGCTTCAAAATCAACAGTTTTGAGCAACTATGCATCAACCTAACGAATGAGAAGTTGCAACAACATTTTAATCAGCATGTATTCAAGATGGAGCAAGAAGAGTACACAAAGGAGGAAATCAATTGGAGCTATGTAGAATTTGTGGATAATCAGGATGTTCTCGATCTTATTGAGAAGAAACCAGGGGGAATTATTGCTCTTCTTGATGAAGCCTGCATGTTCCCTAAATCAACTCATGAGACTTTTGCACAAAAGATGTACCAGACATATAAAGGACACAAGCGCTTCAGCAAGCCAAAACTTTCTCGAACAAATTTCACAATTAACCATTATGCTGGAGATGTCACATATCAAGCAGATTATTTTCTTGATAAAAACAAAGATTATGTTGTAGCAGAGCATCAAGCTCTTTTATGTGCTTCCAAGTGTTCATTTGTTGCTAATATCTTCCCTCCTTTACCAGAGGAGACATCAAAGCAATCAAAATTCTCTTCCATTGGTTCACAATTTAAGCAACAACTGCAATCTCTCATGGAGACACTGAACACAACAGAGCCGCATTACATAAGATGTGTGAAACCAAATACAGTTCTGCAGCCAGGAATCTTTGAGAACTTCAATGTCTTGAACCAACTAAGATGTGGGGGAGTACTTGAGGCAATAAGGATTAGTTGTGCTGGATATCCAACAAAAAGGACATTTGAAGAATTTCTTGATCGCTTTGGAATGCTAGTTCCTGATGTCCTTGATGGCTCTGATGAGAAAAAGGCATCTATGGCCATCTGTGATAAGATGGGTTTAAAAGGCTATCAAATGGGGAAAACAAAGGTATTTCTCAGAGCTGGTCAGATGGCTGAATTAGATGCACGACGAGCCGAAGTCTTAGCTAAAGCGGCCAAACTCATACAGAGACAAATCCGAACACATTTAACGAGAAAGGAGTTTATCACCTTGAGAAAGGCCACTATTCATATCCAAAAGATTTGGAGAGCTAAACTTGCACGTAAACTCTATGAGAATATGAGGAGGGAAGCAGCTTCTATCAGGATACAGAAACACGTGCGTGCACACAGAGCAAGAATGAATTATACAACGTTACAAGCATCAGCTATAGTTATTCAATCAGGTTTGAGAGCATTAGCAGCAAGAAATGAATATAGGTACAGAAGAAGAACAAAGGCTTCAACAAAAATTCAGACACAATGGAGAAGAGCCCAAGCTCTTTCTGGTTACAAACAGCAGAAGAAAGCAACTGTTGCACTTCAATGTCTATGGAGAGCTAAAGTAGCAAGGAAAGAGCTCAGAAAGCTTCGGATGGCTGCAAGAGAAACTGGGGCACTTAAGGAAGCAAAGGACAAGTTGGAGAAGCGTGTTGAGGAGCTTACATGGCGACTGGATATTGAAAAGCACATGAGGACAGATCTTGAAGAAGCTAAAGGGCAAGAGATTGCAAAATTGCAAAATGCTTTACAAGAAATGCAAGGTCAGTTAGATGAAGCCCATGCTGCAATTATACATGAGAGAGAAGCAGCAAAAATAGCAATTGAACAAGCACCACCAGTAATTAAAGAGGTACCTGTTGTGGACAACACAAAGCTAGATTTACTGACAAATAAAAATGAGGAGTTGGAGACTGAAGTAGAAGAGCTGAAAAACAAGATTAAAGACTTTGAAGAAAGGTTCTCAGAAGTCGAGAACGAGAACCAAGAAAGGCTGAAAGAGGCAGAAGAAGCACAGCTTAAAGCAACACAACTTCAGGAGACTATTGAAAGATTAGAATTGAGTTTGTCAAACCTTGAGTCTGAGAACCAGGTTCTATGCCAGAAGGCTTTGGAAGAATCAAAAAATGAAGAACTCTTTGAAGAGATCAAAATCCTCAAGGATCAGATAGCAAATCTAGAATCAGAGAATGAATCCCTACGGAGGCAGGCAGCGGCTGTTGCTTTCGAGCAGAAAGTTCATCCAGAAAAAATAGAATCAGACCATTCAGCAGCTTCTTTGGAGCAGAAAGTTCAACCAGAAAAAATAGAACCAGGCCATTCAGCAACTGCTTTAGAGCAGAAAGTTAATCCAGAAAAAATAGAACCAGTCCATTCAGCAACTGCTTTGGAGCAGAAAGTTCATCCAGAAAAAATAGAACCAGATCATTCAGCAGCTGCTCTAGAGCAGAAAGTTCATCCAGAAAAAATAGAACCAGACCATGAAGTTGCTGTTGCAGAGAAAATGCAAGTGCAACCAAGAGTTATTGCAGATAATATGACTTCACAAATCAAGAATTTGGATAATGGAAGTTCAACCGAGGAAGAATGGCAAGCAAGAAAAGAACCGAGAGCACCAGTCTTCTTGCTTACTAAACAAAGATCACTCACAGATAGGCAACAGGAAAGTCATGATGCACTGCTCAAGTGTCTTACGGAAGATAAGCGATTTGAGAAAAACAGACCAGCTGTTGCTTGTATTGTATATAAATCACTTCTTCATTGGAGATCCCTTGAAGCAGAAAAGACTCATATTTTTGATAAAATTACACATGCTATCCGATCATCTATAGAGAGTCAAGAAGGAATCCATGATCTAGCCTACTGGCTTTCAACAACATCAACACTTCTGTTTTATCTACAATGTACAATGAAGGCCAGCAATACAACTAAGGCAGTGTCACGTAATCGAAACTCGCCCGCCTCTTTGTTTGGCAAAATGGCACAAGGTTTACGTTCATCTTCAATGGGCTTGGGGATTTCAAGTGGCTACAGTGGAATGGTGGACAAGACAAATGGTCAATCTAAAGTAGAAGCCAAGTACCCGGCAATTCTGTTTAAGCAACATTTAACTGCATATGTTGAGAAGATATATGGAATGATCCGTGATAGTTTAAAGAAAGAGATTAGCCCCTTCTTAAATCTGTGTATACAGGCACCAAGATCCATAAGGACTAGATCAATAAGAGGGTCATCCAGAAACATCCATTCAAATATTGTTGCAAAACAACAGGCATTGCATATGTACTGGAAAGGCATTGTGGACAAGCTAGATACTGCCTTGCGTATATTGTCTGATAACTATGTTCCTCCCATCATAACAAGGAAGATATTTAGTCAGGTTTTCTCATTCATGAATGTCCAGCTCTTTAATAGTTTGTTGCTTCGCCGTGAGTGTTGTTCCTTTAGCAATGGAGAATATTTGAAGGCAGGTTTGCATGAGTTGGAACTATGGTGTCTTAAAGCAACAGACCAGTTTGCTGGATCATCTTGGGATGAGCTCAAACACATACGCCAGGCTGTGGGCTTTCTGGTTTTGCATCAAAAGACCCAAAAATCTTTGGAGGAGATCACAAATGAGCTCTGCCCGGTGTTAAGTATTCCACAAATATATCGTATAGGAACTATGTTCTGGGATGACAAGTATGGAGCACATGGATTATCTGCAGAAGTCATTAGCAGAATGAGAGTGATTATGACAGAAGACTCAATAAACATACACAACAGCTCATTCCTTCTAGAGGTGGATTCCAGCATACCATTCTTAATGGAGGAGATGTTCCGGTCAATGAGTGACATCCGCCTATCAGACATGGATGTGGATCCACCACCAATCCTCAGGCAAAGATCTGACTTCCAATTCTTGTTGCAACAAATGGATAGTGACTCTCAGTGA 4971 0.4066 MGTPVNIIVGSQVWVEDPEDAWIDGEVTQIKGKNATIIATNGKTVVAEISSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLATRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAAFGELSPHLFAVADTCYRAMINENGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSATEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNGKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKYKLGDPRQFHYLNQSNCYQVSNVDDAKEYLETRNAMDIVGISQEEQDAIFRVVAAILHLGNVDFVKGKEVDSSKLKDDKSLFHLQTAADLFMCDAKALEDSLCERVIVTPDGNITKPLDPDAAALSRDALAKTVYSKLFDWIVDKINSSIGQDSNAVSIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKLSRTNFTINHYAGDVTYQADYFLDKNKDYVVAEHQALLCASKCSFVANIFPPLPEETSKQSKFSSIGSQFKQQLQSLMETLNTTEPHYIRCVKPNTVLQPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFEEFLDRFGMLVPDVLDGSDEKKASMAICDKMGLKGYQMGKTKVFLRAGQMAELDARRAEVLAKAAKLIQRQIRTHLTRKEFITLRKATIHIQKIWRAKLARKLYENMRREAASIRIQKHVRAHRARMNYTTLQASAIVIQSGLRALAARNEYRYRRRTKASTKIQTQWRRAQALSGYKQQKKATVALQCLWRAKVARKELRKLRMAARETGALKEAKDKLEKRVEELTWRLDIEKHMRTDLEEAKGQEIAKLQNALQEMQGQLDEAHAAIIHEREAAKIAIEQAPPVIKEVPVVDNTKLDLLTNKNEELETEVEELKNKIKDFEERFSEVENENQERLKEAEEAQLKATQLQETIERLELSLSNLESENQVLCQKALEESKNEELFEEIKILKDQIANLESENESLRRQAAAVAFEQKVHPEKIESDHSAASLEQKVQPEKIEPGHSATALEQKVNPEKIEPVHSATALEQKVHPEKIEPDHSAAALEQKVHPEKIEPDHEVAVAEKMQVQPRVIADNMTSQIKNLDNGSSTEEEWQARKEPRAPVFLLTKQRSLTDRQQESHDALLKCLTEDKRFEKNRPAVACIVYKSLLHWRSLEAEKTHIFDKITHAIRSSIESQEGIHDLAYWLSTTSTLLFYLQCTMKASNTTKAVSRNRNSPASLFGKMAQGLRSSSMGLGISSGYSGMVDKTNGQSKVEAKYPAILFKQHLTAYVEKIYGMIRDSLKKEISPFLNLCIQAPRSIRTRSIRGSSRNIHSNIVAKQQALHMYWKGIVDKLDTALRILSDNYVPPIITRKIFSQVFSFMNVQLFNSLLLRRECCSFSNGEYLKAGLHELELWCLKATDQFAGSSWDELKHIRQAVGFLVLHQKTQKSLEEITNELCPVLSIPQIYRIGTMFWDDKYGAHGLSAEVISRMRVIMTEDSINIHNSSFLLEVDSSIPFLMEEMFRSMSDIRLSDMDVDPPPILRQRSDFQFLLQQMDSDSQ* 1657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1337 1656 Pfam Myosin head (motor domain) 64 719 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso8g1337 1656 ProSiteProfiles IQ motif profile. 757 786 IPR000048 GO:0005515
Gso8g1337 1656 SMART DIL_2 1468 1575 IPR002710 -
Gso8g1337 1656 SMART iq_5 781 803 IPR000048 GO:0005515
Gso8g1337 1656 SMART iq_5 804 826 IPR000048 GO:0005515
Gso8g1337 1656 SMART iq_5 852 874 IPR000048 GO:0005515
Gso8g1337 1656 SMART iq_5 733 755 IPR000048 GO:0005515
Gso8g1337 1656 SMART iq_5 756 778 IPR000048 GO:0005515
Gso8g1337 1656 SMART iq_5 829 851 IPR000048 GO:0005515
Gso8g1337 1656 Coils Coil 972 1089 - -
Gso8g1337 1656 Gene3D - 252 310 - -
Gso8g1337 1656 Gene3D Kinesin motor domain 65 662 IPR036961 -
Gso8g1337 1656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 785 IPR027417 -
Gso8g1337 1656 Gene3D - 439 623 - -
Gso8g1337 1656 ProSiteProfiles IQ motif profile. 853 882 IPR000048 GO:0005515
Gso8g1337 1656 PANTHER MYOSIN-12 19 1646 - -
Gso8g1337 1656 ProSiteProfiles Myosin motor domain profile. 62 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso8g1337 1656 Gene3D - 832 881 - -
Gso8g1337 1656 Gene3D - 732 784 - -
Gso8g1337 1656 Gene3D - 785 831 - -
Gso8g1337 1656 CDD MYSc_Myo11 76 719 IPR036018 -
Gso8g1337 1656 SMART MYSc_2a 56 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso8g1337 1656 Coils Coil 876 942 - -
Gso8g1337 1656 CDD MyosinXI_CBD 1230 1616 IPR037975 GO:0007015
Gso8g1337 1656 Pfam IQ calmodulin-binding motif 736 754 IPR000048 GO:0005515
Gso8g1337 1656 Pfam IQ calmodulin-binding motif 758 777 IPR000048 GO:0005515
Gso8g1337 1656 Pfam IQ calmodulin-binding motif 855 874 IPR000048 GO:0005515
Gso8g1337 1656 Pfam IQ calmodulin-binding motif 784 802 IPR000048 GO:0005515
Gso8g1337 1656 ProSiteProfiles IQ motif profile. 782 808 IPR000048 GO:0005515
Gso8g1337 1656 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Gso8g1337 1656 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso8g1337 1656 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso8g1337 1656 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso8g1337 1656 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso8g1337 1656 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso8g1337 1656 ProSiteProfiles IQ motif profile. 734 761 IPR000048 GO:0005515
Gso8g1337 1656 ProSiteProfiles IQ motif profile. 805 834 IPR000048 GO:0005515
Gso8g1337 1656 Coils Coil 723 743 - -
Gso8g1337 1656 Gene3D - 667 729 - -
Gso8g1337 1656 Pfam DIL domain 1469 1572 IPR002710 -
Gso8g1337 1656 Pfam Myosin N-terminal SH3-like domain 10 47 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gso8g1337 1656 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gso8g1337 1656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 882 IPR027417 -
Gso8g1337 1656 PANTHER MYOSIN 19 1646 - -
Gso8g1337 1656 ProSiteProfiles Dilute domain profile. 1279 1593 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1337 Gso-Chr8 12619056 12631924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1337 116 1651 Myosins gene family AT2G31900 62.532 0.0 1862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1337 K10357 - gmx:100786418 3212.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1337 8 12619056 12631924 Gso15g2188 15 50317093 50333343 GST