Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1334 ATGAAGTATGTGTTGGTGACTGGTGGTGTTGTGAGTGGACTTGGGAAAGGAGTCACTGCCAGTAGTATTGGGTTAATCCTCAAGGCCTGTGGTCTTAGAGTTACCTCTATCAAGATTGACCCCTATTTGAACACTGATGCGGGAACAATGTCTCCTTTTGAGCATGGAGAGGTTTTCGTCTTGGATGATGGTGGTGAGGTTGACCTTGATCTTGGAAACTATGAGCGTTTCTTGGATATCAAATTAACTCGTGACAATAATATTACGACTGGAAAAATATATCAGTCTGTTATTGAGAAGGAGAGAAGAGGAGATTATCTTGGAAAGACTGTACAGGTTGTTCCACACATAACAGATGCTATCCAAGAGTGGATAGAACGTGTAGCAAAGATACCAGTTGATGGGAAAGAAGGGCCAGCTGATGTTTGTGTCATTGAATTGGGTGGAACTATAGGGGATATTGAGTCCATGCCTTTTATTGAAGCACTTGGCCAATTTTCATACCGTGTAGGCCCTGGCAACTTCTGTTTGGTTCATGTCAGCCTGGTTCCTATTCTCCATGTTGTTGGTGAACCGAAAACAAAGCCAACTCAGCACAGTGTTCGTCAACTTAGAGGATTAGGTTTGACCCCTAATCTTCTTGCTTGTCGCAGTTCTAAGGAACTTGATGACAATGTCAAGGCAAAGCTTGGTCAATTTTGTCATGTGCCGCTGTCAAACATACTTACTCTCCATGACGTTCCAAATATTTGGCACATTCCTTTGCTATTGAAAGACCAGAAGGCACATGAGGCGATCCTGAAAGCATTAAACTTGCTAGGTGTTGCTGCAGAGCCTAATTTGAAGGAGTGGACTGCAAGAACAAAAGTTTATGACAGATGTCATGAAATTGTTAGAATTGCAATGGTGGGAAAATACACTGGCCTTTCAGATGCATATCTTTCTGTTCTGAAGGCACTTTTACATGCTTCTGTTGCTCGAAACCGTAAACTTATTGTGGACTGGGTTCCAGCTGGGGATCTTGAAGAAGCTACTTATAATGAGGATCCTGAGGCGCATAAAGCTGCTTGGAGTCTTTTAAAGGGTGCTAATGGGGTTCTAGTTCCAGGAGGTTTTGGTGATAGAGGAGTGCAAGGGAAAATTCTTGCTGCTAAGTATGCTCGAGAACATAATGTTCCATTTCTTGGCATTTGCCTGGGGATGCAAATTGCTGTTATTGAGTTTGCACGATCTGTTCTCGGTCTGCATGATGCTACTAGCACAGAATTCAATCCTGAAACCAAGACCCCTTGTGTCATATTTATGCCAGAAGGCTCCAAGACTCATATGGGAGGAACTATGCGTCTTGGTTCAAGAAGAACTTACTTTGAAGTTGCTGACTGCAAATCTGCAAAATTGTATGGCAATGCTAGCTTTGTTGATGAGCGACATCGGCATAGATATGAGGTTAATCCTGACATGATATCACAGCTAGAGAATGCTGGTCTATCTTTCGTTGGGAAAGATGAAACTGGGAGGCGCATGGAAATAGTTGAATTGCCTAGCCATCCTTTTTTTATTGGCGTTCAGTTTCACCCTGAGTTCAAGTCTAGACCAGGGAAACCTTCTCCACTCTTCTCAGGATTAATAGCAGCAGCAAGTGAACAAAGGAGTACAATCATGGTGCCAAGTAGTAATGGTCATGCCAAGTTAACTAACGGAAATGGAATGTACAATGGACACTCGCCGAAACTTAAAGCACACCAAAAGGGAAATGGCTTCAAGGCATCCAATGGTTCCTTAAATGGTATATATACCAATGGAAATGGGGTGTATGTGGATGGTAGTTGTTAG 1833 0.4277 MKYVLVTGGVVSGLGKGVTASSIGLILKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQEWIERVAKIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLVHVSLVPILHVVGEPKTKPTQHSVRQLRGLGLTPNLLACRSSKELDDNVKAKLGQFCHVPLSNILTLHDVPNIWHIPLLLKDQKAHEAILKALNLLGVAAEPNLKEWTARTKVYDRCHEIVRIAMVGKYTGLSDAYLSVLKALLHASVARNRKLIVDWVPAGDLEEATYNEDPEAHKAAWSLLKGANGVLVPGGFGDRGVQGKILAAKYAREHNVPFLGICLGMQIAVIEFARSVLGLHDATSTEFNPETKTPCVIFMPEGSKTHMGGTMRLGSRRTYFEVADCKSAKLYGNASFVDERHRHRYEVNPDMISQLENAGLSFVGKDETGRRMEIVELPSHPFFIGVQFHPEFKSRPGKPSPLFSGLIAAASEQRSTIMVPSSNGHAKLTNGNGMYNGHSPKLKAHQKGNGFKASNGSLNGIYTNGNGVYVDGSC* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1334 610 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Gso8g1334 610 Pfam Glutamine amidotransferase class-I 309 544 IPR017926 -
Gso8g1334 610 TIGRFAM PyrG: CTP synthase 1 545 IPR004468 GO:0003883|GO:0006221
Gso8g1334 610 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Gso8g1334 610 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Gso8g1334 610 SUPERFAMILY Class I glutamine amidotransferase-like 298 549 IPR029062 -
Gso8g1334 610 Gene3D - 295 558 IPR029062 -
Gso8g1334 610 PANTHER CTP SYNTHASE 1 576 - -
Gso8g1334 610 PANTHER CTP SYNTHASE 1 576 IPR004468 GO:0003883|GO:0006221
Gso8g1334 610 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Gso8g1334 610 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Gso8g1334 610 Gene3D - 1 292 IPR027417 -
Gso8g1334 610 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1334 Gso-Chr8 12554834 12561628 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1334 K01937 - gmx:100788720 1219.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1334 8 12554834 12561628 Gso15g2192 15 50430996 50437663 GST
Gso15g1827 15 37201225 37209219 Gso8g1334 8 12554834 12561628 PCT
Gso8g1933 8 19281260 19288735 Gso8g1334 8 12554834 12561628 PCT