Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1329 ATGACATCAAATCCTGTCAAGATGCCTGATTTACGTGAGACAAAGATGGAGCACAAGTTGTCAGAAGGGGCACACCCTAGTGCTCATAGTAGCTGTTCAAATTCAGGAAACAACTCACCAACTCATCCCAAGAATGTGAACCAAGAACCAAAAGACACCAGCACAACAACAACAACAACAAATGTCCACAACTCAGGAAATGAAACTGGACATGTGGACCAGGCTTCCAAAACTGATCAAGCAAAATTGGAAGGTAAATCCAGACCCCAGAAGTTAATTCCACCAAGCAGGAACATATCTGATTTCAACCCTCAACAACATCAAAGTCCAAGCACAAATAAGCCTAATTCAAATTCTGATCATCCTCCTCATGCAAAGGCAATGTCTGTGTCTACCCCTCAAACAAAGACTAGTAGTACGAATAATCTTCAAGGTCAAGGAAGTGGTGCTAGTTCTCGCAGTGACAGCTTAGAGAGCACAAGTGCACCCATTAGGCCACACACTGGTGGTGATGTGAGGTGGGAAGCTATTAACATGATTTCAAGGGTTGGCCCTCTCAATCTCAGCCATTTCAGGCTTCTCAAGCGAATCGGTTATGGAGACATTGGAAGTGTGTACCTTGTGGAACTTAAGGGAACAAGGACCTACTTTGCTATGAAAGTTATGGACAAGGCAGCTCTTATAAGCAGAAATAAGCTTCTGAGGGCACAGACAGAAAGGGAGATTCTTGGACTCCTTGATCACCCCTTCCTCCCAACTTTGTATTCTTATTTTGAAACTCGTAAGTTCTATTGTTTGGTCATGGAATTCTGTAGTGGGGGTGATCTTCATTCTCTTAGACAGAAGCAACCTAATAAGTGTTTCACTGAAGAAGCTGCAAGATTTTATGCTTCAGAGGTTTTGTTAGCTCTGGAATACTTGCACATGCTTGGCATTGTATACAGAGACTTAAAGCCAGAGAATCTTCTAGTCAGAGACGAAGGGCACATCATGCTCTCAGATTTTGATTTATCCCTTCGCTGCTCCGTCAACCCTACACTAGTCAAGTCTTCTTCTGCCCATGCAAGCAACAGTAGTAGTGGCAGCAACAACGATGTTGGCAGCATATTAACCGATGACCAAGCAGTGCAAAGCACTACTCAGGTATCAAGTTTTTTCCCACGCATTTTGCCTTCGAAGAAGAACCGCAAGGCAAAGTCAGATTTTGGCATACTGGTTGGCGGAGGACGCCTTCCTGAGCTGATGGCAGAACCCACCAATGTGCGTTCGATGTCATTTGTAGGGACACATGAGTACCTTGCTCCTGAGATTATCAAAGGAGAGGGTCATGGTAGTGCAGTAGACTGGTGGACTTTTGGGATCTTCTTGTATGAGTTGTTGCATGGAACAACCCCTTTCAAGGGTTCAGGATATAAAGCCACACTTTTCAATGTTGTTGGACAACCACTTAGATTCCCAGAAACTCCCCAAGTCAGTGCCGTGGCTCGTGACCTTATTAGAGGGTTGTTGGTGAAAGAGCCTCAGAAGAGAATTGCATACAAGAGAGGAGCTACAGAGATAAAACAACATCCATTTTTTGAGGGCATGAACTGGGCTCTGGTTAGAAGTGCCACCCCTCCCCACATACCAGAGGTTATAGATTTCTCAAAGTATGCTAGCAAAGACACAGCACCCCCACCAGACAAGAAGATGGCAGATATTGCTAATGATAAACACAGCAACAGTGCTACTGATTCTTACATAGAATTTGAGTATTTTTAG 1761 0.4412 MTSNPVKMPDLRETKMEHKLSEGAHPSAHSSCSNSGNNSPTHPKNVNQEPKDTSTTTTTTNVHNSGNETGHVDQASKTDQAKLEGKSRPQKLIPPSRNISDFNPQQHQSPSTNKPNSNSDHPPHAKAMSVSTPQTKTSSTNNLQGQGSGASSRSDSLESTSAPIRPHTGGDVRWEAINMISRVGPLNLSHFRLLKRIGYGDIGSVYLVELKGTRTYFAMKVMDKAALISRNKLLRAQTEREILGLLDHPFLPTLYSYFETRKFYCLVMEFCSGGDLHSLRQKQPNKCFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVNPTLVKSSSAHASNSSSGSNNDVGSILTDDQAVQSTTQVSSFFPRILPSKKNRKAKSDFGILVGGGRLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLHGTTPFKGSGYKATLFNVVGQPLRFPETPQVSAVARDLIRGLLVKEPQKRIAYKRGATEIKQHPFFEGMNWALVRSATPPHIPEVIDFSKYASKDTAPPPDKKMADIANDKHSNSATDSYIEFEYF* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1329 586 ProSiteProfiles Protein kinase domain profile. 191 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1329 586 MobiDBLite consensus disorder prediction 552 573 - -
Gso8g1329 586 SMART serkin_6 191 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1329 586 PANTHER FLIPPASE KINASE 1-RELATED 48 586 - -
Gso8g1329 586 MobiDBLite consensus disorder prediction 10 24 - -
Gso8g1329 586 MobiDBLite consensus disorder prediction 1 168 - -
Gso8g1329 586 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 48 586 - -
Gso8g1329 586 MobiDBLite consensus disorder prediction 93 163 - -
Gso8g1329 586 Pfam Protein kinase domain 423 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1329 586 Pfam Protein kinase domain 192 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1329 586 Gene3D Transferase(Phosphotransferase) domain 1 275 347 - -
Gso8g1329 586 MobiDBLite consensus disorder prediction 26 74 - -
Gso8g1329 586 Gene3D Phosphorylase Kinase; domain 1 189 274 - -
Gso8g1329 586 SUPERFAMILY Protein kinase-like (PK-like) 179 559 IPR011009 -
Gso8g1329 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672|GO:0006468
Gso8g1329 586 CDD STKc_phototropin_like 189 547 - -
Gso8g1329 586 Gene3D Transferase(Phosphotransferase) domain 1 420 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1329 Gso-Chr8 12510803 12515206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1329 157 586 AGC Kinase Gene Family AT1G79250 72.406 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso8g1329 Pkinase 7.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1329 - - gmx:100784301 1132.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1329 8 12510803 12515206 Gso15g2194 15 50457883 50461934 GST
Gso8g1329 8 12510803 12515206 Gso8g1937 8 19325947 19328600 PCT