Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1324 ATGACCTGGCCTCGAGGCCCAAATGTAAATGCTGAAAGGGCATTAACGTCATTTCTCAATGTTAGGGTTTTGTCTTTGTCTCTCGCTCGCCCATTTTTGCATAATAGTAGAGAACCTTCAGAAACCCTAATTTCTCAAACATTCAGAGGGCACCCGGCAACACCAAAACCACCACCGCCTCTCCTACCTCCCGGAGCCATGGCCGCCACCGACTCCTCCGCTGCTTCGTCACGCCAGCTTTCGCAGAGGGAGACGGACATCCAGATGATGCTCGCCGCCGACGTTCACCTCGGCACCAAAAACTGCGACTTTCAGATGGAACGCTACGTCTTCAAGCGCCGCACCGATGGTATTTACATAATTAACCTTGGAAAGACATGGGAGAAGCTTCAGCTTGCTGCTAGGATTATAGTCGCCATTGAGAACCCACAGGATATCATCGTTCAGTCCGCCAGGCCTTATGGCCAGAGGGCAGTTCTAAAGTTTGCTCAATACACTGGAGCTCATGCAATTGCAGGAAGGCACACTCCCGGAACATTCACTAATCAGATGCAGCAATCCTACAATGAGCCTCGTCTTCTGATTCTAACTGATCCAAGAACAGATCATCAGCCTATCAAGGAAGGTGCTCTTGGAAATATTCCAACTATTGCTTTTTGTGACACTGATTCTCCAATGCGGTATGTTGATGTCGGGATCCCTGCCAATAATAAGGGGAAGCATAGCATTGGTTGTCTCTTTTGGCTATTAGCAAGGATGGTACTGCAGATGCGGGGCACTATTCGTCCAGGGCACAAGTGGGATGTAATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAAGATGAAGCACCACCTGCCCAAGATTATGCCATTTCAGACTTCAATGCTGCTGGCATTGGCAGCTTCCCTGCTACTGATGGCCAATGGCCTGCTGCAGTCGAACAACCCTGGACTGAAGAAGCTCCACAACCAATCTCAGCAGCTCCTACTAACTGGACACCAGAAGCAGCTGCTGCAGGAGATTGGGGTGAGGCTGTTCCAGCTCCTGCTCCAGCTCCAGTTCCACAAGCTGGTGCGCCTCCAGCTCAAGCTTTTCCTCCTGCTACTGGCTGGGACTAG 1140 0.5044 MTWPRGPNVNAERALTSFLNVRVLSLSLARPFLHNSREPSETLISQTFRGHPATPKPPPPLLPPGAMAATDSSAASSRQLSQRETDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQQSYNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEEAKQQEEDEAPPAQDYAISDFNAAGIGSFPATDGQWPAAVEQPWTEEAPQPISAAPTNWTPEAAAAGDWGEAVPAPAPAPVPQAGAPPAQAFPPATGWD* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1324 379 PANTHER 40S RIBOSOMAL PROTEIN SA 62 365 - -
Gso8g1324 379 Hamap 40S ribosomal protein SA [rps-0]. 74 352 IPR027498 GO:0003735|GO:0006412|GO:0015935
Gso8g1324 379 PANTHER 40S RIBOSOMAL PROTEIN SA 62 365 IPR005707 GO:0003735|GO:0006412|GO:0015935
Gso8g1324 379 MobiDBLite consensus disorder prediction 355 369 - -
Gso8g1324 379 PRINTS Ribosomal protein S2 signature 87 105 IPR001865 GO:0003735|GO:0005840|GO:0006412
Gso8g1324 379 PRINTS Ribosomal protein S2 signature 117 126 IPR001865 GO:0003735|GO:0005840|GO:0006412
Gso8g1324 379 PRINTS Ribosomal protein S2 signature 166 183 IPR001865 GO:0003735|GO:0005840|GO:0006412
Gso8g1324 379 PRINTS Ribosomal protein S2 signature 191 208 IPR001865 GO:0003735|GO:0005840|GO:0006412
Gso8g1324 379 PRINTS Ribosomal protein S2 signature 208 219 IPR001865 GO:0003735|GO:0005840|GO:0006412
Gso8g1324 379 PRINTS Ribosomal protein S2 signature 229 243 IPR001865 GO:0003735|GO:0005840|GO:0006412
Gso8g1324 379 MobiDBLite consensus disorder prediction 323 379 - -
Gso8g1324 379 Pfam Ribosomal protein S2 90 184 IPR001865 GO:0003735|GO:0005840|GO:0006412
Gso8g1324 379 Gene3D - 86 291 - -
Gso8g1324 379 CDD RPS2 90 256 IPR001865 GO:0003735|GO:0005840|GO:0006412
Gso8g1324 379 SUPERFAMILY Ribosomal protein S2 83 272 IPR023591 -
Gso8g1324 379 MobiDBLite consensus disorder prediction 47 81 - -
Gso8g1324 379 ProSitePatterns Ribosomal protein S2 signature 2. 191 215 IPR018130 GO:0003735|GO:0005840|GO:0006412
Gso8g1324 379 TIGRFAM uS2_euk_arch: ribosomal protein uS2 83 278 IPR005707 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1324 Gso-Chr8 12479490 12482220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1324 69 357 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 71.478 6.42e-150 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1324 K02998 - gmx:100786575 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1324 8 12479490 12482220 Gso15g2197 15 50490427 50493028 GST