Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1319 ATGTATTCAATTGCAATGGAATCACCGCAAGGCTTCCCACACTATACAAAGGAGGACCTCCACATCATGAAAAGCAGAGGCAAGAAGAAGAATAGAGCAAGAGAAATTGGAATGGAAGGCAGAGGTGGAGGAGAAGTGAGAAGGCTTCACATCATTTACTTCCTTAGTCAGATAGGTGGTCGTGCAGATCATCCTCATCTGATTCGTGTTCTTCATCTTGCTCGAAATGGGGTTTATCTAAGAGATGTAAAGAGATGGCTTGGGGAATTGAGAGGAAAAGACTTGCCAGATGCTTTTTCTTGGTCCTACAAGAGGAGGTACAAGAGTGGATATGTGTGGCAAGACTTGTTGGATGACGACCTCATAACCCCCATCTCTGACAATGAATACGTCCTCAAAGGATCACAAATCCACCCTACCCCATTTGCAACAACTCCTTCACTTGATGAAAAGAAAACTACTGTTTGTGATATCCATGCTGAGAAGAAATGTAGTCAAGTACAAACTATAGAGGACAAAAACCAGCAGCCGCCTCTAGCAGAAGAAGAACCTCGAATTCAACGAGACTTGGATTTGAAAACGGATACTCCGACAAAAGGGTCATCAGAAATCAGCCAGGACTCATCATTGGTCTTCAGCTCAGACAGGTCATCTGTGACAGATGATGACTCTTCAAAGGTCGAAGAAGAGAAGCATTTAGAGGCAACAGGCAAAGACGGCTTCAACGAAATCAACCAAGAGAAGTTAGAGGATTGCTCATTGCCTTCCTTGTATCACAATCTGTTGAGTAAGAAGGCTAGCCACAAAGATGACCTGAATAAAACCAACTCACCTGATTCATCCTCCTCCACTATATCATCATCTTCATCTCAATCCTCCTTTACTAAGATCAGGAGCAATTCTGCCAGAGTTTCTAATGTGTTCCGCAATTGGATCACTTGTGGCACTGTGGAAACAAATGATGCAGCCCTGGTCCAAATGAACCTGGCTCAAAAGAATTTATCTAAGGAACCTATCAACATACCTGAAAGAAGGGCTGAGATTTGTAAGGGAGACAAATTGGGAGGATCAGCCAGGTGTTTTGCGACTTCTTGGGGTCATCATCACCAGAAACAACAATATGGGGCAAGAAAAAGCTTTGATGGAAATGAAACTAGCAGGAGCAGGAAAAAGTTAGGGGAGTTGCTAAATCAAACTTCTTCCAAACCATTTGGTGGACCAACCTGCTCGCAATGCGGGAAGTCGTTTAAGCCTGAGAAAATGCACAAACACATGAAGTCTTGTAAAGGAATGAAAGCCTTGGGAAAGTCCTCCACAACTGTTGAGGAGGCACAGCTTCAGGGATCATCAGCTTCTTATACAGATTACTTTTTGACCAACTAA 1383 0.4331 MYSIAMESPQGFPHYTKEDLHIMKSRGKKKNRAREIGMEGRGGGEVRRLHIIYFLSQIGGRADHPHLIRVLHLARNGVYLRDVKRWLGELRGKDLPDAFSWSYKRRYKSGYVWQDLLDDDLITPISDNEYVLKGSQIHPTPFATTPSLDEKKTTVCDIHAEKKCSQVQTIEDKNQQPPLAEEEPRIQRDLDLKTDTPTKGSSEISQDSSLVFSSDRSSVTDDDSSKVEEEKHLEATGKDGFNEINQEKLEDCSLPSLYHNLLSKKASHKDDLNKTNSPDSSSSTISSSSSQSSFTKIRSNSARVSNVFRNWITCGTVETNDAALVQMNLAQKNLSKEPINIPERRAEICKGDKLGGSARCFATSWGHHHQKQQYGARKSFDGNETSRSRKKLGELLNQTSSKPFGGPTCSQCGKSFKPEKMHKHMKSCKGMKALGKSSTTVEEAQLQGSSASYTDYFLTN* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1319 460 MobiDBLite consensus disorder prediction 197 218 - -
Gso8g1319 460 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 39 445 IPR010369 -
Gso8g1319 460 MobiDBLite consensus disorder prediction 276 296 - -
Gso8g1319 460 MobiDBLite consensus disorder prediction 176 196 - -
Gso8g1319 460 MobiDBLite consensus disorder prediction 267 296 - -
Gso8g1319 460 MobiDBLite consensus disorder prediction 219 242 - -
Gso8g1319 460 MobiDBLite consensus disorder prediction 167 242 - -
Gso8g1319 460 Pfam Protein SOSEKI, plant 50 328 IPR010369 -
Gso8g1319 460 PANTHER F3F20.2 PROTEIN 39 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1319 Gso-Chr8 12417238 12422631 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gso8g1319 DUF966 9.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1319 - - gmx:100785001 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1319 8 12417238 12422631 Gso15g2200 15 50519304 50522626 GST