Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1301 ATGCCGGCTTGGTGGAATAGAAAGTGGAGCAAGAGCAAGGAGGAGCAGGAGCAGCCGGAGGAGGAGGATGAGGAGGAAGAGCCACGTGCCGCTTTTCAGCTGAATTTCATGAGCGGTGAGCGGGACAAGAACAAGGGTAGGAGTTGTAGTAAGAAGAAGACCAAGAGCTTCGACGACAAGGTCAAAGGGGTTCCGTTACCACTTCCCTCGCATAGTCTCAGCGATCCAGTTCAATCATTTGGATCTGTTTCGGTGTCCGGTGGTTCCAGCGTCAGCTCCTCCACCTCCTACGACGATCATCCAATTTCGCCTCCCAACACCAACAGAGGACGAGAGGAGGTGAGGTTCAATGTGAGGACAAAAAGTCCGGGTCCTGGGTCAAGAGGACCTACCAGTCCTACCTCACCGCTTCATCAAAGGTTGCATGCTTTGAGCCTTGACTCTCCCACGGGGAGTGAGTGTCATCCATTACCTCTTCCACCTGGCTCTCCAACTAGTCCTTCTTCTGTGCTTCCCAACGCTAGAGCAAATGGACATTTGGAAAATGCTACCAGCAATGTGTCCAAATGGAGAAAAGGAAAGCTTCTAGGACGGGGAACATTTGGGCATGTTTATCTGGGATTCAATAGTGAAAATGGACAAATGTGTGCAATAAAAGAAGTCAAGGTTGTCTTTGATGATCACACATCAAAAGAGTGCCTCAAACAACTTAACCAGGAGATAAATTTGCTAAATCAGCTTTCACACCCAAATATTGTTCAATACTATGGGAGTGAACTGGTAGAAGAATCACTTTCTGTATATTTGGAATATGTCTCTGGTGGTTCTATCCATAAATTACTTCAGGAGTATGGTCCATTTAAGGAGCCTGTTATTCAAAATTATACCAGGCAGATTGTCTCTGGACTTGCCTATCTGCATGGAAGAAATACAGTACACAGGGATATTAAAGGGGCGAACATACTAGTTGATCCTAATGGTGAAATCAAACTGGCAGACTTTGGAATGGCTAAACATATAAATTCTTCTGCCTCGATGCTTTCATTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTTGTAATGAATACAAATGGCTATAGCCTTCCAGTTGATATATGGAGCTTGGGGTGCACAATTATTGAAATGGCAACATCAAAACCTCCCTGGAATCAGTATGAAGGGGTAGCTGCCATATTTAAAATTGGGAACAGCAAAGATATGCCTGAAATCCCCGAGCATCTTTCGAATGATGCAAAAAAATTCATCAAGCTATGCTTACAAAGAGACCCATTAGCTCGCCCGACAGCCCAAAAGTTACTAGACCACCCCTTCATTCGAGATCAATCAGCAACAAAAGCTGCAAATGTCAGCATAACCAGAGATGCTTTCCCTTGCATGTTTGATGGAAGCCGGACACCGCCTGTGTTAGAGTCCCATTCCAACCGAACAAGCATAACTTCTCTTGATGGAGATTATGCATCAAAGCCAGCTCTTGCAGCACCACGTGCATTAAGGAGTTCAAGAGATAACACAAGAATCATCACATCTTTACCAGTATCTCCCTCTTCAAGTCCATTGCGAAGGTATGAGCCAATGCATCAGAGCTGTTTTTTTTCTCCTCCTCATCCAGCTTACACCACAATGGGACAAAGTAGTTACACTTTGAATGACAGATCCTCATATCCAATGAGATCAAATGCCACGTTTGCTCTTGATCCTTGGCATGAAACATCTCGATACAGAGCCAATACACCACCTGGTGGATCTCCAAGAATGAGACTCATTTAA 1791 0.4489 MPAWWNRKWSKSKEEQEQPEEEDEEEEPRAAFQLNFMSGERDKNKGRSCSKKKTKSFDDKVKGVPLPLPSHSLSDPVQSFGSVSVSGGSSVSSSTSYDDHPISPPNTNRGREEVRFNVRTKSPGPGSRGPTSPTSPLHQRLHALSLDSPTGSECHPLPLPPGSPTSPSSVLPNARANGHLENATSNVSKWRKGKLLGRGTFGHVYLGFNSENGQMCAIKEVKVVFDDHTSKECLKQLNQEINLLNQLSHPNIVQYYGSELVEESLSVYLEYVSGGSIHKLLQEYGPFKEPVIQNYTRQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSASMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTIIEMATSKPPWNQYEGVAAIFKIGNSKDMPEIPEHLSNDAKKFIKLCLQRDPLARPTAQKLLDHPFIRDQSATKAANVSITRDAFPCMFDGSRTPPVLESHSNRTSITSLDGDYASKPALAAPRALRSSRDNTRIITSLPVSPSSSPLRRYEPMHQSCFFSPPHPAYTTMGQSSYTLNDRSSYPMRSNATFALDPWHETSRYRANTPPGGSPRMRLI* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1301 596 MobiDBLite consensus disorder prediction 1 175 - -
Gso8g1301 596 ProSiteProfiles Protein kinase domain profile. 190 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1301 596 MobiDBLite consensus disorder prediction 72 103 - -
Gso8g1301 596 SMART serkin_6 190 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1301 596 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 577 - -
Gso8g1301 596 CDD STKc_MEKK1_plant 189 446 - -
Gso8g1301 596 Gene3D Transferase(Phosphotransferase) domain 1 187 465 - -
Gso8g1301 596 ProSitePatterns Protein kinases ATP-binding region signature. 196 219 IPR017441 GO:0005524
Gso8g1301 596 PANTHER MAP KINASE KINASE KINASE 1 577 - -
Gso8g1301 596 SUPERFAMILY Protein kinase-like (PK-like) 188 447 IPR011009 -
Gso8g1301 596 Pfam Protein kinase domain 191 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1301 596 MobiDBLite consensus disorder prediction 124 141 - -
Gso8g1301 596 MobiDBLite consensus disorder prediction 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1301 Gso-Chr8 12232681 12237600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1301 1 503 MAP Kinase Kinase Kinase AT1G53570 57.169 2.88e-180 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gso8g1301 Pkinase 1.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1301 K04421 - gmx:100780004 986.482