Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1291 ATGGGTTTTCGTTTACCTGGTATCAGAAGGCCATCATTTGCTGCAAACATAGCATCTTCAAAAGCTGGGGAGGTGCCAAAGGGCTATATCGCAGTCTATGTTGGAGAGAGAATGAAGCGGTTTGTGATCCCTATATCATACTTGTCGCAACCTTCATTCCAAGACTTGTTGAGTCTAGTGGAGGAAGAGTTCGGATACGATCATCCCATGGGCGGCCTCACAATTCCTTGTAGCGAAGATGTCTTCCAACATATAACTTCTTCTTTAAATGGACAATAA 279 0.4373 MGFRLPGIRRPSFAANIASSKAGEVPKGYIAVYVGERMKRFVIPISYLSQPSFQDLLSLVEEEFGYDHPMGGLTIPCSEDVFQHITSSLNGQ* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1291 92 Pfam Auxin responsive protein 15 89 IPR003676 GO:0009733
Gso8g1291 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Gso8g1291 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1291 Gso-Chr8 12120198 12120678 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1291 24 92 Calmodulin-binding Proteins AT3G43120 46.377 1.69e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1291 K14488 - gmx:100500483 188.348