Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1290 ATGGGTTTCCGTTTACCTGGTATCAGAAAGGGAATATTTGCAGCCAACCAAGCATCATCAAAAACGGTGGATGCACCAAAGGGATACCTTGCAGTTTATGTTGGAGAGAAAATGAAGCGATTTGTGATCCCTGTGTCATACTTGAACCAACCTTCATTTCAAGACTTGTTGAATCGAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGCGGCCTCACAATTCCTTGCAGCGAAGATGTCTTCCAACATATAACTTCTTGTTTGAATGGACAATAA 279 0.4229 MGFRLPGIRKGIFAANQASSKTVDAPKGYLAVYVGEKMKRFVIPVSYLNQPSFQDLLNRAEEEFGYDHPMGGLTIPCSEDVFQHITSCLNGQ* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1290 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 91 - -
Gso8g1290 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
Gso8g1290 92 Pfam Auxin responsive protein 16 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1290 Gso-Chr8 12113507 12114295 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1290 24 92 Calmodulin-binding Proteins AT3G43120 49.275 1.54e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1290 K14488 - gmx:100820621 190.274