Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1269 ATGGCGCCGAAGAAGCCCAGAACCACGTCGAGGAACCCTGATTTGGTCAGGGGAATTGGCAAATATTCGAGGTCGCAGATGTACCACAAGAGGGGCATCTGGGCCATCAAGGCCAAAAACGGCGGTGTTTTGCCCCTCCACGATCCCAAGCCCAAACCCGAGGCCCCGGCCCAGAAGCCGCCCAAGTTCTACCCGGCCGATGACGTGAAGAAGCCCCTCGTCAACAAGCACAAGCCCAAGCCCGCGAAACTCAGGGCTAGCATTACTCCAGGGACTGTTCTGATCCTGCTTGCTGGGAGGTTCAAGGGAAAGAGGGTTGTTTTCTTGAAGCAGCTTCCATCTGGATTGCTTCTTGTAACAGGTCCCTTTAAGATCAATGGGGTTCCTCTGAGAAGGGTGAACCAATCGTATGTTATTGGTACATCCACAAAGGTGGATATCTCTGATGTCAATGTTGATAAATTTGATGACAAGTACTTTGCCAAGGAAGCTAAGAAAAAGAAAACAAAGGGCGAAGGCGAATTCTTTGAGGCAGAGAAGGAGGAGAAAAATGTGCTTCCCCAAGAAAAGAAAGATGACCAAAAAACCGTGGACACTGCTTTGTTAAAGGCCATTGAGAGTGTTCCAGAGCTCAAGTCTTACTTGGGTGCTAGGTTTTCCTTGAAGGCAGGAGTGAAGCCCCATGAGCTAGTTTTCTAG 699 0.4979 MAPKKPRTTSRNPDLVRGIGKYSRSQMYHKRGIWAIKAKNGGVLPLHDPKPKPEAPAQKPPKFYPADDVKKPLVNKHKPKPAKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISDVNVDKFDDKYFAKEAKKKKTKGEGEFFEAEKEEKNVLPQEKKDDQKTVDTALLKAIESVPELKSYLGARFSLKAGVKPHELVF* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1269 232 MobiDBLite consensus disorder prediction 44 81 - -
Gso8g1269 232 PANTHER 60S RIBOSOMAL PROTEIN L6 1 232 IPR000915 GO:0003735|GO:0005840|GO:0006412
Gso8g1269 232 Pfam Ribosomal protein L6e 125 232 IPR000915 GO:0003735|GO:0005840|GO:0006412
Gso8g1269 232 Gene3D - 86 170 IPR014722 -
Gso8g1269 232 MobiDBLite consensus disorder prediction 1 21 - -
Gso8g1269 232 Pfam Ribosomal protein L6, N-terminal domain 4 60 IPR005568 GO:0003735|GO:0005840|GO:0006412
Gso8g1269 232 PANTHER 60S RIBOSOMAL PROTEIN L6 1 232 - -
Gso8g1269 232 SUPERFAMILY Translation proteins SH3-like domain 86 172 IPR008991 -
Gso8g1269 232 CDD KOW_RPL6 80 232 IPR041997 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1269 Gso-Chr8 11762516 11765012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1269 3 232 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 80.603 6.38e-120 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1269 K02934 - gmx:100811720 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1269 8 11762516 11765012 Gso15g2235 15 50996979 50999317 GST