Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1264 ATGGGGAAGTTATCAATCAAATTGCACGATAAGTGCAAGAACCGCAAGGAATCATCATCATGGCCATTAACAAATTGTTTTCACCACGGTGGTGGAAGAGATGATGCAATTGGAATTGCACAAGAATGTAACGTTGATTTTTCTAATCTCTTCATTGGGCGCAAGTTTTCTCAAGGTGCACATAGTCAAATTTACCATGGTGTATACAAAAAGGAACATGTTGCTGTCAAATTCGTCAAGGTACGAGATAATGATGTAAAGGGAATCCCAAAATCCCTTTTGGAGGCTCAATTTTTAAGAGAAGTCATACATCTACCTCGTCTCCACCATCAAAATGTTGTAAAGTTCATAGGCGCATACAAAGACACTGATTTTTATTACATTCTCACGGAGTATCAACAAAAGGGGTCTTTGAGGGTGTATTTGAACAAGGTAGAGTCCAAGCCAATTTCTCTGAAGAGGGTGATAGCTTTTGCTTTGGATATTGCTCGTGGAATGGAGTATATACATGCACAAGGGATCATTCATAGAGACCTTAAACCAGAGAATGTCCTTGTTGATGGGGAAATTCGCCTCAAAATTGCTGATTTTGGCATTGCTTGTGAGGCTTCGAAGTTTGATTCGTTGAGGGGTACCTACCGTTGGATGGCTCCGGAGATGATCAAAGGAAAACGCTATGGGAGAAAGGTTGATGTGTACAGTTTTGGTCTTATTTTGTGGGAGTTGTTGAGTGGAACAGTGCCATTTGAGGGCATGAATCCAATCCAGGTTGCTGTTGCTGTGGCAGATAGGAATTCAAGGCCAATTATTCCTTCACATTGCCCACATGTTTTGAGTGATTTGATAAAGCAGTGTTGGGAATTGAAAGCTGAGAAGAGGCCTGAGTTCTGGCAGATTGTTCGAGTTTTGGAGCAATTAGATCAAGGTTGCAGTTTCTTGTCCTCCAAGAAACTCAAGTAA 960 0.4115 MGKLSIKLHDKCKNRKESSSWPLTNCFHHGGGRDDAIGIAQECNVDFSNLFIGRKFSQGAHSQIYHGVYKKEHVAVKFVKVRDNDVKGIPKSLLEAQFLREVIHLPRLHHQNVVKFIGAYKDTDFYYILTEYQQKGSLRVYLNKVESKPISLKRVIAFALDIARGMEYIHAQGIIHRDLKPENVLVDGEIRLKIADFGIACEASKFDSLRGTYRWMAPEMIKGKRYGRKVDVYSFGLILWELLSGTVPFEGMNPIQVAVAVADRNSRPIIPSHCPHVLSDLIKQCWELKAEKRPEFWQIVRVLEQLDQGCSFLSSKKLK* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1264 319 Pfam Protein tyrosine and serine/threonine kinase 52 303 IPR001245 GO:0004672|GO:0006468
Gso8g1264 319 PANTHER SERINE-THREONINE PROTEIN KINASE 11 307 - -
Gso8g1264 319 SMART serkin_6 50 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1264 319 Gene3D Phosphorylase Kinase; domain 1 39 134 - -
Gso8g1264 319 SUPERFAMILY Protein kinase-like (PK-like) 40 303 IPR011009 -
Gso8g1264 319 PRINTS Tyrosine kinase catalytic domain signature 130 143 IPR001245 GO:0004672|GO:0006468
Gso8g1264 319 PRINTS Tyrosine kinase catalytic domain signature 168 186 IPR001245 GO:0004672|GO:0006468
Gso8g1264 319 PRINTS Tyrosine kinase catalytic domain signature 211 221 IPR001245 GO:0004672|GO:0006468
Gso8g1264 319 PRINTS Tyrosine kinase catalytic domain signature 230 252 IPR001245 GO:0004672|GO:0006468
Gso8g1264 319 PRINTS Tyrosine kinase catalytic domain signature 274 296 IPR001245 GO:0004672|GO:0006468
Gso8g1264 319 PIRSF ILK 35 318 - -
Gso8g1264 319 CDD STKc_MAP3K-like 52 303 - -
Gso8g1264 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Gso8g1264 319 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 11 307 - -
Gso8g1264 319 Gene3D Transferase(Phosphotransferase) domain 1 135 317 - -
Gso8g1264 319 ProSiteProfiles Protein kinase domain profile. 50 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1264 Gso-Chr8 11731503 11732556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1264 5 318 MAP Kinase Kinase Kinase AT5G58950 52.484 4.10e-115 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gso8g1264 PK_Tyr_Ser-Thr 5.3e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1264 - - gsj:114421104 653.669