Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1253 ATGGAAAACCACCAAAACCACAAGGTAGAACCAGAACCTGACATAGAGAAGAACCATAACCACCGCCACCAACAGCAACAACACCGTAACGAAGCGTGGGGCACCTGGGAGGAGCTGTTGCTAGCGTGCGCCGTGAACCGCCATGGCTTCACGGACTGGGACGCCGTCGCCATGGAGGTCCAGTCGCGCACCACGCGCCTCCTCGCCACCGCGCGCCACTGCGAGCAGAAATTTCATGATCTCAGCCGCCGATTCGCCGTCCAATGCAACGACGACGTTCCTCCGCCGCGCCAGAACGGCGCCGCCGCCGCTATCTCTGATCACGTCCCCTGGCTCGACGAATTGCGCAAACTCCGCGTTGCCGAGCTCCGCCGCGACGTCCAACGCAGTGACGTTTCCATTCTGTCGTTGCAGTTGGAGGTGAAGAGGTTGGAGGAGGAGAAAGCGCAGGAAAAAGACTTAAAGGACGACGAGAAACCAGATCTGGCGGTTTCCGGCGAGTTGCGGCCGGAAAACGACAAAACCGGCGGAGAAGTGGAAGAGGCTGGACCGGCGAATTCCGAACCGGAGGAAAGAACCGCGAACAACACAGACAAGACGTTGCCAACCACGGGCGACGAATCAGACCGGGAGAACCAGTCGGTTAACGAGTCCAACTCGACCGGTTCGCGGTTCGAGAAAACCGGAGATGGCGACGCGAAGACCGGAACCGGACCGGATCCGGTTCATACCGGTTCGCAGGAACCGGATCCGGTCGAGCGGAAGGGAAAGCCGGTTGGAGAGGAATCGAATAACGGAAGCTACGATGCGTTGGCGAAGGTGCCAACGTGCGAGTCGGTGCCTCCGAGTGAGGGGAGGAAAGTGGAGGAAGACGATGACTCATCCGAGTTACATGACTCGGTGGCTCACTCGGGCGAAGGAGGGACGCGCGAGAGCAGCGAGGTGCAGAGCTCCGCGAGCTTAATGCGTAAGAGGAAGACGCGGCGGAGGAAGGAGGTTTCCGGAGCCACTGACGCCTCGTGTCCGGCGGAGAACGACGAGGCGGCGACGGTGAAATCAGAACCGTTGGTTGGGGTTTTGGAGTTGATCAAGGGGCACGAACACAGCTCATTGTTCGAGCGCCGTCTTGATAGCCAGCAGGATACGGATAGATACAAAGACCTAGTGAAACAGCCCATGGACTTGGAAACCATACAATTGAGACTCCAAAAGGGTCACTATTCCTCATGCACCAGTGCATTCTTCCGCGACCTCCTCCTCCTCTTCACCAACGCCACCGTGTTCTTCTCCCATGACTCCCCGGAATCGCAGGCGGGGCGGCAGCTGCACCGCCTTGCCACCGCGGAGATGAAGAACCACGGCCAAGCACAATCGGATCCTATCCCCCGGAAGAACGATTCACTCCCTCCAAATGCACCATTAGCTAAACCAGATTCTCTCCTTTCCAAGAACAAAGCCTCTGGTCCTATATTGGTTTGCCGCAAACGCAGTTCAATGTCATCCAAACCTTCCTCTGCCACCTTTGGCCAAAAGGGTGACCAACCCGTCTTCAATGACAAGAAGGAAAGGCCATCTTCTGATGCAAAGCCACCCATGAAGCCCTCTTCTTCTGATACAGACGAAGAGGAGCTTCCCAAAGCTAAGGAAAAGCCTGTTACTGGAGCAAGAAGCTTGAGGCGGAGCAACAAGAACCTCAATAGTAATAGTAGTAATAATAATAATAAGAAACCGTCCTCTATCTCCACTCCTAAGGCAGGGTCCTCGGGGAACAAGCCTTCGGAGACTGTTAAACCGGAAAAGAGCAAAGCAGAGGGGGGGGCAGACAAGAAGAGGAGTGCAGCTGCAGATTTCCTGAAACGGATTAAGCGCAACACTTCAGCGGAAGCATCGAAGGGTGGTAGTGGCGGTGGAAGCGGGGGTGGAGGAGGAGGAGGAGGAGGAAGTAGCAGCAGCAGCAAAGGTGGTGGAGGTGGTAATGGTGCCAAAGAGCAGAAGAAAATGGTGAACAATGGAAAGGGAGACAAAGGGAAAGAAAGGGCATCAAGGCATAATAACGTTGGAGGAGGTTCAGGCTCTGCGGATAAAAGGAATAATAAGAATATTGAGAACAGCTCTCAGTCAAAGAGGAGTGTTGGTAGACCTCCAAAGAAAGCAGCAGAGACAAATGCAGGTAGTGCAAAGCGTGGGAGAGAAAATAGTGCTAGTGCTGGAAAGGATAAGCGACCCAAGAAACGTTCCAAGAAATGA 2247 0.5505 MENHQNHKVEPEPDIEKNHNHRHQQQQHRNEAWGTWEELLLACAVNRHGFTDWDAVAMEVQSRTTRLLATARHCEQKFHDLSRRFAVQCNDDVPPPRQNGAAAAISDHVPWLDELRKLRVAELRRDVQRSDVSILSLQLEVKRLEEEKAQEKDLKDDEKPDLAVSGELRPENDKTGGEVEEAGPANSEPEERTANNTDKTLPTTGDESDRENQSVNESNSTGSRFEKTGDGDAKTGTGPDPVHTGSQEPDPVERKGKPVGEESNNGSYDALAKVPTCESVPPSEGRKVEEDDDSSELHDSVAHSGEGGTRESSEVQSSASLMRKRKTRRRKEVSGATDASCPAENDEAATVKSEPLVGVLELIKGHEHSSLFERRLDSQQDTDRYKDLVKQPMDLETIQLRLQKGHYSSCTSAFFRDLLLLFTNATVFFSHDSPESQAGRQLHRLATAEMKNHGQAQSDPIPRKNDSLPPNAPLAKPDSLLSKNKASGPILVCRKRSSMSSKPSSATFGQKGDQPVFNDKKERPSSDAKPPMKPSSSDTDEEELPKAKEKPVTGARSLRRSNKNLNSNSSNNNNKKPSSISTPKAGSSGNKPSETVKPEKSKAEGGADKKRSAAADFLKRIKRNTSAEASKGGSGGGSGGGGGGGGGSSSSSKGGGGGNGAKEQKKMVNNGKGDKGKERASRHNNVGGGSGSADKRNNKNIENSSQSKRSVGRPPKKAAETNAGSAKRGRENSASAGKDKRPKKRSKK* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1253 748 MobiDBLite consensus disorder prediction 515 556 - -
Gso8g1253 748 MobiDBLite consensus disorder prediction 306 320 - -
Gso8g1253 748 MobiDBLite consensus disorder prediction 283 305 - -
Gso8g1253 748 MobiDBLite consensus disorder prediction 595 626 - -
Gso8g1253 748 MobiDBLite consensus disorder prediction 557 594 - -
Gso8g1253 748 SUPERFAMILY Homeodomain-like 28 65 IPR009057 -
Gso8g1253 748 Pfam Myb-like DNA-binding domain 32 65 IPR001005 -
Gso8g1253 748 MobiDBLite consensus disorder prediction 1 28 - -
Gso8g1253 748 Coils Coil 127 157 - -
Gso8g1253 748 Pfam Bromodomain 359 438 IPR001487 GO:0005515
Gso8g1253 748 SMART sant 29 84 IPR001005 -
Gso8g1253 748 MobiDBLite consensus disorder prediction 685 711 - -
Gso8g1253 748 MobiDBLite consensus disorder prediction 667 682 - -
Gso8g1253 748 CDD SANT 32 64 IPR001005 -
Gso8g1253 748 SUPERFAMILY Bromodomain 352 455 IPR036427 GO:0005515
Gso8g1253 748 MobiDBLite consensus disorder prediction 1 30 - -
Gso8g1253 748 ProSiteProfiles Bromodomain profile. 364 436 IPR001487 GO:0005515
Gso8g1253 748 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 15 748 - -
Gso8g1253 748 SMART bromo_6 130 455 IPR001487 GO:0005515
Gso8g1253 748 MobiDBLite consensus disorder prediction 147 178 - -
Gso8g1253 748 MobiDBLite consensus disorder prediction 147 348 - -
Gso8g1253 748 MobiDBLite consensus disorder prediction 450 748 - -
Gso8g1253 748 Gene3D - 311 461 IPR036427 GO:0005515
Gso8g1253 748 CDD Bromodomain 359 450 - -
Gso8g1253 748 PANTHER BNAC04G22430D PROTEIN 15 748 - -
Gso8g1253 748 MobiDBLite consensus disorder prediction 497 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1253 Gso-Chr8 11573661 11578773 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso8g1253 Bromodomain 4.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1253 - - gmx:100811021 1326.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1253 8 11573661 11578773 Gso15g2224 15 50808464 50813562 GST