Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1233 AAGAGTAAAATCAGAATTCACCACTCTCACGAATCTCAATCATTGTTTATTTTCTCATTTTCTTATCTCTCAGTCATTCACATTTCACACACAAACGATGACGTTTTAAGTTTCTTGGCGATTCCCTTTCAAGTGTTTGCGAGAGAATGGAGTTCGGTCGGGAAGCCGGGGAGGTGGGAGGCGATAGCGGCGGCGTTCGGGGGGAGGCACAGGGTGGAGAGTGTGATAAAAAAAGCGAAGGAATTGGGGGAGAAGAGAGTGGATGATTCGGAATCGTATGCGCAGTTTTTGAAGAAGAGGAAGGCGTTGGATAAGAGGGTTGTGGAGGAGAATGAGGGTGAAAGTGAGGGGAAAGCAGTTGATAATGGTTGGAGTTCTGCTGAGGATATTGCATTGCTGAATGCTTTGAAAGCGTTTCCTAAGGAAGCTTCCATGAGGTGGGAGAAGGTTGCTGCTGCTTTTCCCGGGAGATCCAAGCCTGCTTGCATGAAGAGATTCGCCGAATTGAAGAAAGGCTTTCTGACTGCAAAAGCTGCAGCCGAGTAG 546 0.4744 KSKIRIHHSHESQSLFIFSFSYLSVIHISHTNDDVLSFLAIPFQVFAREWSSVGKPGRWEAIAAAFGGRHRVESVIKKAKELGEKRVDDSESYAQFLKKRKALDKRVVEENEGESEGKAVDNGWSSAEDIALLNALKAFPKEASMRWEKVAAAFPGRSKPACMKRFAELKKGFLTAKAAAE* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1233 181 SMART sant 120 172 IPR001005 -
Gso8g1233 181 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 53 181 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Gso8g1233 181 ProSiteProfiles Myb-like domain profile. 124 170 IPR001005 -
Gso8g1233 181 Gene3D - 115 181 - -
Gso8g1233 181 PANTHER TRANSCRIPTION FACTOR MAMYB 53 181 - -
Gso8g1233 181 SUPERFAMILY Homeodomain-like 120 171 IPR009057 -
Gso8g1233 181 CDD SANT 124 170 IPR001005 -
Gso8g1233 181 Gene3D - 45 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1233 Gso-Chr8 11289283 11290030 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso8g1233 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1233 - - gmx:102662652 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1611 5 39398890 39400100 Gso8g1233 8 11289283 11290030 GST