Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1225 ATGAAAGGAAGCAAGAAGCCTTATCTAGTTGTGATCCTCATAGAAGCCATCTATGCTGCCATGTTTCTGCTCTCAAAAGCTGCATTTGACCATGGCATGAACAATTTCATCTTTGTCTTCTATAGACAGACAACAGCCACCATATTCCTTATCCCTTTTGCTTTCTTCTTTGAATGCAGGAAAACTGCACCTCCTTTGACCTTGGTGACCTTCTGCAAGATCTTTTTCCTTTCTTTCCTGGGGATCAGTGCGAGCTTGGACATATATGGTATTGGTCTTATTTACACTTCTGCTACTTTAGCTGCTGCTACCACAAACTGCCTTCCAGTCATCACCTTCTTCTTGGCGCTCATACTCAGGATAGAAAATTTGAAAGTAACGAGTACCTCGGGGGTTGCTAAGTTGGTTGGTGTAGTGGCATGCTTGACGGGATCAGCAATTCTTGCTTTCTATAAAGGTCCTCATTTAGAAGTTTTAAGCCATTATCACGTTTTAGGGTACCATAAAAACCAACAACATCTGGGTCGTGTTGCATCTGGGACATGGATTAAGGGTTGCTTCCTCTTGCTACTCTCCAACACCTTTTGGGGAATGTGGCTTGTGCTACAGACTTATGTCATAAAAGGATACCCTTCAAAGCTGCTCCTCACAACTCTTCAGTGTTTCTTAAGCTCGATTCAGTCTTTGGGCATTGCCTTGGCCGTAGAAAGAGATATTGAGCAATGGAAGTTGGGATGGAATGTCAGACTCCTTGCCGTAGTATATTGTGGAATCATGGTGACCGGTGTAACATATTACTTACAAACATGGGTTATAGAGAAGAAAGGACCGGTGTTTCTAGCCATGGCAACACCACTTGCTTTGATCATGACCATCTTCTCCTCCGCAGTTCTCTTGGGCGAGATCATAACTTTGGGAAGCCTTTTAGGTGGCATCGCTTTGGTCATTGGACTGTACTGCGTGCTGTGGGGAAAGAGCAGAGAGCAAATGCCAAAAGCCTCGTTAGACTTGGAGGAGGCATCATCGGGTTAG 1032 0.4438 MKGSKKPYLVVILIEAIYAAMFLLSKAAFDHGMNNFIFVFYRQTTATIFLIPFAFFFECRKTAPPLTLVTFCKIFFLSFLGISASLDIYGIGLIYTSATLAAATTNCLPVITFFLALILRIENLKVTSTSGVAKLVGVVACLTGSAILAFYKGPHLEVLSHYHVLGYHKNQQHLGRVASGTWIKGCFLLLLSNTFWGMWLVLQTYVIKGYPSKLLLTTLQCFLSSIQSLGIALAVERDIEQWKLGWNVRLLAVVYCGIMVTGVTYYLQTWVIEKKGPVFLAMATPLALIMTIFSSAVLLGEIITLGSLLGGIALVIGLYCVLWGKSREQMPKASLDLEEASSG* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1225 343 PANTHER WAT1-RELATED PROTEIN 8 330 IPR030184 GO:0016021|GO:0022857
Gso8g1225 343 Pfam EamA-like transporter family 6 135 IPR000620 GO:0016020|GO:0016021
Gso8g1225 343 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Gso8g1225 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 327 - -
Gso8g1225 343 PANTHER WAT1-RELATED PROTEIN 8 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1225 Gso-Chr8 11220704 11225425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1225 4 256 Nodulin-like Gene Family AT5G64700 60.311 4.86e-95 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1225 - - gmx:100796986 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1600 5 39313744 39318744 Gso8g1225 8 11220704 11225425 GST
Gso8g1225 8 11220704 11225425 Gso6g1261 6 12295693 12298138 PCT
Gso6g1261 6 12295693 12298138 Gso8g1225 8 11220704 11225425 PCT