Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1223 ATGGCAAATGAACTACCCGTCAAAGCTTTTGGTTGGGCTGCTTCAGACACTTCTGGCACCCTTGCCCCTTTTCATTTCTCCAGAAGGGAAAATGGCGTCGATGACGTCACTCTCAAGATTCTCTTCTGCGGGGTTTGCCACTCTGATCTCCACACTCTCAAAAACGACTGGGGTTTCACCACCTACCCTGTCGTTCCTGGGCATGAAATTGTTGGTGTTGTGACAGAAGTTGGAAACAATGTGAAAAACTTCAAAGTGGGTGATAAAGTTGGAGTTGGTGTGATAGTGGAGTCTTGCAAGGAATGTGAAAATTGCCAACAGGATCTGGAGAATTACTGTCCCCGCCCTGTGTTTACCTATAACTCTCCTTATTATGATGGGACACGAACCCAAGGTGGTTATTCTAACATTGTGGTCGTGCACCAGCGTTATGTGCTCCGGTTTCCTGAGAACTTGCCCCTTGATGCTGGTGCTCCTCTGCTGTGTGCTGGGATAACTGTGTATAGCCCAATGAAATATTATGGGATGACAGAGCCAGGCAAACATTTGGGAGTGGCAGGGCTTGGTGGGTTAGGCCATGTTGCAATCAAACTTGCTAAGGCTTTTGGGCTCAAAGTTACTGTCATTAGTAGTTCTCCAAACAAGCAAGCTGAGGCCATTGACCGACTCGGGGCTGATTTTTTCCTTGTTTCATCAGACCCTGCAAAAATGAAGGCTGCTTTGGGAACCATGGACTATATCATAGACACAATTTCTGCTGTTCATTCCTTGATTCCACTGCTTGGTCTGCTGAAGCTGAATGGGAAGCTAGTTACTGTAGGGTTGCCTAACAAACCCCTTGAGCTTCCTATCTTTCCTTTAGTTGCAGGACGAAAGCTTATAGGGGGGAGCAACTTTGGAGGGCTGAAAGAAACTCAGGAAATGCTTGATTTCTGCGGAAAGCACAACATAACTGCAGATATTGAGCTGATTAAGATGGATCAGATCAACACAGCCATGGAAAGGCTTAGCAGAGCTGATGTGAAATATCGCTTTGTGATTGATGTGGCGAGCTCTTTCTCAAGTTTTTAG 1071 0.4613 MANELPVKAFGWAASDTSGTLAPFHFSRRENGVDDVTLKILFCGVCHSDLHTLKNDWGFTTYPVVPGHEIVGVVTEVGNNVKNFKVGDKVGVGVIVESCKECENCQQDLENYCPRPVFTYNSPYYDGTRTQGGYSNIVVVHQRYVLRFPENLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKLAKAFGLKVTVISSSPNKQAEAIDRLGADFFLVSSDPAKMKAALGTMDYIIDTISAVHSLIPLLGLLKLNGKLVTVGLPNKPLELPIFPLVAGRKLIGGSNFGGLKETQEMLDFCGKHNITADIELIKMDQINTAMERLSRADVKYRFVIDVASSFSSF* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1223 356 SMART PKS_ER_names_mod 19 347 IPR020843 GO:0016491
Gso8g1223 356 Gene3D - 163 319 - -
Gso8g1223 356 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 8 353 - -
Gso8g1223 356 SUPERFAMILY GroES-like 18 181 IPR011032 -
Gso8g1223 356 PANTHER ALDEHYDE REDUCTASE 8 353 - -
Gso8g1223 356 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 152 317 IPR036291 -
Gso8g1223 356 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Gso8g1223 356 CDD CAD1 10 348 - -
Gso8g1223 356 Pfam Zinc-binding dehydrogenase 190 311 IPR013149 -
Gso8g1223 356 Gene3D - 12 349 - -
Gso8g1223 356 Pfam Alcohol dehydrogenase GroES-like domain 34 146 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1223 Gso-Chr8 11194155 11197562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1223 8 353 Monolignol Biosynthesis Gene Families AT2G21730 70.977 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1223 K00083 - gmx:100795575 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1598 5 39287920 39292235 Gso8g1223 8 11194155 11197562 GST