Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1209 ATGTCAACAACTTCCCATCCCATTGTTCACCACAGCTTATTCGATGAGCAGGACCAGATACCTACACAGATGGGTTTCTTTTCCTTTCCAACAAACCTTACTTTCCCTCCTTTGGGCTGCCATCAATCCTCTTTGAAAGCCTTTAGTTCCATAGCACCTTCTTCACTTGCTATATCTCAACAAGATTCTGCATCAAATCTAACAGCAGAAACCCTATTCTCAACCACTGCTCAAAAGTCAAGAGAAGACCTCACTTCTAGCTTTGGAGGAGGTCAATTCCTATCCTTGCATAGATCAAGTGTAAATCCATGGGCATTGGGAGAAGTGGCTGAATGCTTCAGCAGTAAAAGAAGTGGATTTGATGATCATCATTTCCGAATTTCAGCCATGAAGATGAAGAAAATCAAGGCAAGAAGGAAGGTGAGAGAGCCTAGGTTTTGCTTCAAGACCATGAGCGATGTGGATGTATTGGACGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTTGTGAAGAACACGCAGCACCCCAGAAGCTATTACCGTTGCACACAAGATAATTGTCGTGTAAAGAAACGCGTGGAACGCTTAGCCGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGACATGTTCACTCTCCATCAAATGATCTCGAAGACTCTCAAACTCCATCTCAACTTGATAGCTTCTTATTATGGTAG 708 0.435 MSTTSHPIVHHSLFDEQDQIPTQMGFFSFPTNLTFPPLGCHQSSLKAFSSIAPSSLAISQQDSASNLTAETLFSTTAQKSREDLTSSFGGGQFLSLHRSSVNPWALGEVAECFSSKRSGFDDHHFRISAMKMKKIKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNDLEDSQTPSQLDSFLLW* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1209 235 Pfam WRKY DNA -binding domain 158 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g1209 235 ProSiteProfiles WRKY domain profile. 152 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g1209 235 SMART WRKY_cls 157 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g1209 235 Gene3D WRKY domain 144 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g1209 235 SUPERFAMILY WRKY DNA-binding domain 149 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g1209 235 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 43 225 - -
Gso8g1209 235 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 43 225 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1209 Gso-Chr8 11032356 11034795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1209 42 222 WRKY Transcription Factor Family AT4G39410 49.362 1.25e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso8g1209 WRKY 1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1209 - - gmx:732585 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1579 5 39133584 39135470 Gso8g1209 8 11032356 11034795 GST