Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1201 ATGGACTTCTACTTTGGAAACTCTCCTCCTTATCCCAATAATTATGCTCATAATTCTCTTAATATGGCTCTATCTTCCCCTGAGATTGCACTATCCGATTATCTCATGCTCGATGACTATGTTGATCATCAAGATTCTCGATCATCACAAAGCACCGAGTCATCTGAAAAAGCAACCTTCAGTGATGCCACTCACGGATTCAGTACTGGTGCAACCTCTAAGAATAATAACATAAACTGCAAAAATGGGATTAATGAAAACAAAGGTGGAGTGGGTCCAAGGATCGCGTTTAGAACCAAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGAAAGAGATAGAGATGACTACAGCTACGTGATAACAACATATGAAGGTGTGCACAATCATGAGAGCCCATTTACCACATACTACAGCCCCATCTCCTTCGTACATTCTGATACTACTTTCAAATGA 555 0.4144 MDFYFGNSPPYPNNYAHNSLNMALSSPEIALSDYLMLDDYVDHQDSRSSQSTESSEKATFSDATHGFSTGATSKNNNINCKNGINENKGGVGPRIAFRTKSELEIMDDGYKWRKYGKKSVKSSPNLRNYYKCSSGGCSVKKRVERDRDDYSYVITTYEGVHNHESPFTTYYSPISFVHSDTTFK* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1201 184 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 17 171 IPR044810 GO:0003700
Gso8g1201 184 ProSiteProfiles WRKY domain profile. 101 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g1201 184 Gene3D WRKY domain 91 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g1201 184 SMART WRKY_cls 106 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g1201 184 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 17 171 - -
Gso8g1201 184 Pfam WRKY DNA -binding domain 107 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g1201 184 MobiDBLite consensus disorder prediction 45 66 - -
Gso8g1201 184 MobiDBLite consensus disorder prediction 51 66 - -
Gso8g1201 184 SUPERFAMILY WRKY DNA-binding domain 98 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1201 Gso-Chr8 10937225 10940514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1201 91 174 WRKY Transcription Factor Family AT5G64810 71.429 2.88e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso8g1201 WRKY 1e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1201 - - gmx:732583 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1570 5 39044935 39048071 Gso8g1201 8 10937225 10940514 GST