Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1198 ATGGCGCCGAAGATAACACGTAAGGTTAGCAGAAACCCCGAATTGATAAGGGGAATCGGAAAGTACTCGAGGTCTCAAATGTACCACAAGAGGGGCATTTGGGCTATCAAGGCCAAAAACGGTGGCGTTTTACCTCGCCACGGTCCTAAACCCAAACCTGAAACTCCCGCTGAAAAACCACCCAAATTTTACCCTGCTGACGATGTCAAGAAACCCCTTGTCAACAAGCACAAACCCAAACCCGCGAAGCTCAGGGCTAGCATTACTCCCGGGACAGTGTTGATTCTTCTTGCCGGTAGATTTAAGGGAAAGAGGGTAGTCTTTTTGAAGCAGCTTCCTTCTGGGTTGCTTCTTGTAACTGGTCCTTTCAAGATTAATGGAGTTCCTTTGAGACGTGTGAATCAGTCCTATGTTATTGGCACTTCAACCAAAGCAAATGTCTCTGCTGTTAATGTCGACCAGTTTGATGACAAATACTTTGCAAAGGAAGCCCAGAAGAAGAAGAAGGGAGAGGGTGAATTCTTTGAGGCAGAGAAGGAGGAAAAGAGTGTGTTGCCCCAGCAGAAGAAAGATGACCAGAAAACTGTTGACTCTGCGTTGATAAAAGCCATCGAGAGTGTTCCAGACTTGAAGACTTATCTGGGTGCCAGGTTTTCTCTAAAGGCTGGCGTGAAACCTCATGAGCTAGTCTTCTAG 696 0.4655 MAPKITRKVSRNPELIRGIGKYSRSQMYHKRGIWAIKAKNGGVLPRHGPKPKPETPAEKPPKFYPADDVKKPLVNKHKPKPAKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKANVSAVNVDQFDDKYFAKEAQKKKKGEGEFFEAEKEEKSVLPQQKKDDQKTVDSALIKAIESVPDLKTYLGARFSLKAGVKPHELVF* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1198 231 MobiDBLite consensus disorder prediction 51 75 - -
Gso8g1198 231 Pfam Ribosomal protein L6, N-terminal domain 7 60 IPR005568 GO:0003735|GO:0005840|GO:0006412
Gso8g1198 231 MobiDBLite consensus disorder prediction 39 81 - -
Gso8g1198 231 CDD KOW_RPL6 80 231 IPR041997 -
Gso8g1198 231 Pfam Ribosomal protein L6e 125 231 IPR000915 GO:0003735|GO:0005840|GO:0006412
Gso8g1198 231 Gene3D - 86 169 IPR014722 -
Gso8g1198 231 SUPERFAMILY Translation proteins SH3-like domain 86 176 IPR008991 -
Gso8g1198 231 PANTHER 60S RIBOSOMAL PROTEIN L6 1 231 IPR000915 GO:0003735|GO:0005840|GO:0006412
Gso8g1198 231 PANTHER 60S RIBOSOMAL PROTEIN L6 1 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1198 Gso-Chr8 10917609 10919341 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1198 6 231 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 80.176 7.69e-118 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1198 K02934 - gmx:100500022 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1566 5 39023510 39025038 Gso8g1198 8 10917609 10919341 GST