Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1187 ATGATTTGGATAGCAGCTTTTTTAGTTTCTCTTGCTTTTCTGTGGTTATGGATAAGCAACAAGAATGCAAAGAAATTACCACCTGGTCCCATAGGGTTGCCAATTTTGGGAAGCCTTCACAAGTTGGGTGCAAATCCTCATCGTGGCCTGCACCAACTAGCCCAAAAATATGGACCTATCATGCACTTACGCTTAGGTTTTGTGCCCACCATAGTTATTTCTTCCCCCCAAGCTGCTGAACTGTTCCTCAAGACCCATGACCTTGTCTTTGCTAGTAGACCACCCCATGAAGCTATAAAGTACATTGCTTGGGAGCAGAGGAACTTGGGATTTGCTGAATATGGTTCTTACTGGCGCAACATGCGCAAGATGTGCACATTGGAATTGCTTAGCCAAACCAAAATTAACTCCTTCAGAATCGTGAGAGAAGAAGAACTTGACCTATCCATCAAGCTTCTAAGAGAGGCATCCAATGATGGAGCTGCTGCTGTTGATATCAGTGCCAAGGTTGCAAGAATCAGTGCAGACATGGCTTGTAGAATGGTCTTGGGAAAGAAGTACATGGACCAGGACTTGGATGAGAAGGGGTTTAAGGCTGTGGTGCAAGAGGTAATGCACTTACTAGCAACTCCTAACATAGGTGATTACATTCCTTACATTGGTAAACTTGACCTTCAAGGGCTAATCAAGCGTATGAAGGCGGTTCGCAAAATCTTTGATGAATTCTTTGACAAAATTATTGATGAGCATATTCAATCAGACAAGGGACAAGACAATAAGGTGAAGGATTTTGTGGATGTCATGTTGGGCTTTGTTGGTAGCGAGGAATATGAATACCGTATTGAACGGCCCAATATCAAAGCTATATTGCTGGATATGCTGTTGGGTTCAATGGATACTTCGGCTACAGTAATTGAGTGGACACTTTCAGAGCTCCTAAAGAATCCACGGGTGATGAAGAAAGTCCAAATGGAGTTGGAAACTGTGGTGGGTATGCAGAGGAAGGTGAAGGAATCAGACTTGGACAAGTTGGAGTATTTGGATATGGTTATAAAGGAAAACATGAGGCTCCATCCAGTGGCACCGTTACTAATACCACACCAATCGAGGGAAGATTGCATGGTTGGAGATTTTTTCATACCAAGAAAATCAAGAGTGGTAATAAATGCATGGGCAATTATGAGAGACTCAAGTGTATGGAGTGAGGCAGAGAAGTTCTGGCCAGAGAGATTTGAAGGAAGCAACATAGATGTGAGAGGGCATGACTTCCAGTTTATACCATTCGGGTCTGGCAGAAGGGCCTGTCCAGGAATGCAAATGGGTCTAACAATGGTTCGACTAACAGTGGCACAACTTGTGCATTGTTTTCATTGGAAACTGCCGAGTGACATGTTGCCAGATCACTTGGACATGACAGAAGAGTTCGGCCTCACTATGCCAAGGGCCAATCATCTACTTGCCGTTCCAACTTATCGGCTTCACACTGCAAGTGATTAG 1497 0.4389 MIWIAAFLVSLAFLWLWISNKNAKKLPPGPIGLPILGSLHKLGANPHRGLHQLAQKYGPIMHLRLGFVPTIVISSPQAAELFLKTHDLVFASRPPHEAIKYIAWEQRNLGFAEYGSYWRNMRKMCTLELLSQTKINSFRIVREEELDLSIKLLREASNDGAAAVDISAKVARISADMACRMVLGKKYMDQDLDEKGFKAVVQEVMHLLATPNIGDYIPYIGKLDLQGLIKRMKAVRKIFDEFFDKIIDEHIQSDKGQDNKVKDFVDVMLGFVGSEEYEYRIERPNIKAILLDMLLGSMDTSATVIEWTLSELLKNPRVMKKVQMELETVVGMQRKVKESDLDKLEYLDMVIKENMRLHPVAPLLIPHQSREDCMVGDFFIPRKSRVVINAWAIMRDSSVWSEAEKFWPERFEGSNIDVRGHDFQFIPFGSGRRACPGMQMGLTMVRLTVAQLVHCFHWKLPSDMLPDHLDMTEEFGLTMPRANHLLAVPTYRLHTASD* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1187 498 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 494 - -
Gso8g1187 498 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1187 498 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1187 498 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1187 498 Gene3D Cytochrome P450 18 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1187 498 PANTHER CYTOCHROME P450 93A3-LIKE 2 494 - -
Gso8g1187 498 SUPERFAMILY Cytochrome P450 27 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1187 498 Pfam Cytochrome P450 27 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1187 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Gso8g1187 498 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1187 498 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1187 498 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1187 498 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1187 498 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1187 498 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1187 498 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1187 498 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1187 Gso-Chr8 10844598 10846742 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1187 34 496 Monolignol Biosynthesis Gene Families AT4G36220 41.458 9.83e-130 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1187 K20562 - gmx:100781617 991.49