Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1174 ATGGCACTCTCAGTCTCCTCACCCTCATGCGTACGCGTTCCTTCATGTTTTTGGAAACCAAATGGCAAGAGTTGCAAAGAGCGTACTAAGGTGTCATGTGCAGCTCACAATGATAATAAGAATCCGTTGGTTGGAATCGGTATTGGGGTTGTAACGTCTTGTGTGATGGGTTTAACTGCATTGGATGCGGACGCCACGAGAATCGAATACTACGCAACAGTGGCAGAGCCTTTGTGTGAGTACAACTATGTTAAGTCTGGCCTCGGCTACTGCGATATTGCTGAGGGCTTCGGTGACGAAGCTCCACTGGGTGAGCTTATCAATGTTCACTATACTGCGAGATTCGCTGATGGGATAGTATTCGATAGCAGCTATAAACGTGCTAGACCTCTCACCATGCGCATTGGTGTGGGCAAGGTAATCAAGGGACTGGATCAGGGGATTTTAGGGGGTGAAGGAGTACCTCCAATGCGGATAGGTGGGAAACGCAAACTGCAGATTCCTCCGCACTTAGCATATGGCCCTGAACCTGCAGGGTGCTTCTCAGGTGACTGCAATATACCCGCCAATGCCACTCTTCTGTATGATATTAATTTTGTTGAGGTTTATTCGGGGAACAGATCAAAGTGA 630 0.481 MALSVSSPSCVRVPSCFWKPNGKSCKERTKVSCAAHNDNKNPLVGIGIGVVTSCVMGLTALDADATRIEYYATVAEPLCEYNYVKSGLGYCDIAEGFGDEAPLGELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIKGLDQGILGGEGVPPMRIGGKRKLQIPPHLAYGPEPAGCFSGDCNIPANATLLYDINFVEVYSGNRSK* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1174 209 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 104 203 IPR001179 GO:0003755
Gso8g1174 209 Gene3D - 77 201 IPR046357 GO:0003755
Gso8g1174 209 SUPERFAMILY FKBP-like 81 202 - -
Gso8g1174 209 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 23 207 IPR044183 GO:0009507
Gso8g1174 209 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 101 198 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1174 Gso-Chr8 10729989 10731537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1174 80 200 Calmodulin-binding Proteins AT3G25230 39.837 7.13e-16 73.6