Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1159 ATGACGCAGAATGCAATAGTGTCCAAGACAAAATCCGGGATCAAGGGGGACATAGCCGTGGCACAGAAGCCACTGGCGGCGCCGCCGCCGCCGGGGTACATTCCCATTCCGAGGAGGAGGGTTTTGAAGAACCTCGAAATCAATGGAGGACAAAGAATTAATGCATGGGTTGATTCCATGAGAGCCTCTTCTCCAACCAATTCCAAATCCACCTCTTCTCTCGCAGAAGAACACAGCTCTTGGATTCTTCGCCACCCTTCAGCATTAGACATGTTTGAGCAAATTATGGATGCGTCCAGGGGAAAGCAAATTGTCATGTTCCTCGACTATGATGGTACTTTGTCGCCTATTGTTGATGACCCAGACCATGCTTTCATGTCGGATTCGATGAGGAGAACGGTGAGGAAACTTGCAAGGTGTTTTCCTACTGCTATAGTTACCGGCAGATGCAAAGACAAGGTTTACAGTTTTGTTCGCTTGGCTGAGCTATATTATGCTGGAAGCCATGGCATGGATATTCAAGGGCCAACAAGAGACTGCAAATACAGCAAAGACAAAGGAGAGCCAGTTCTTTTTCAACCTGCCAGTGAATTTCTTCCCATGATTGATGAGGTGCACCAACAATTAGTTGAGAAAATGAAATCAATTCCTGGAGCCAAGGTGGAGAACAATAAGTTCTGCTGTTCTGTTCATTTTCGCTGCGTTGATGAAAAGAAATGGAGTGAACTGGCACAAGAAGTGAGATCAGTATTAAAAGAGTACCCGAAGCTTCGTCTTAACCAAGGAAGGAAGGTATTGGAGATTCGTCCATCTATTAAATGGGACAAAGGAAAGGCGCTGGAATTTTTGTTAGAGTCACTTGGATTTGCCAACTGTAACGATGTCTTTCCTGTTTACATTGGAGACGATAAAACCGATGAAGATGCATTCAAGAAATTAAGAGACAGAGGACAAGGTTCTGGGATTCTTGTCTCGAAATTTCCAAAGGACACTAGTGCATCATACTCTTTACAAGAACCAAACGAGGTGATGGATTTCCTTCAACGTTTGGTTGAGTGGAAACAAGTATCCCTCCGACTCAGAACACGTTCTCGGGTGTAA 1101 0.4478 MTQNAIVSKTKSGIKGDIAVAQKPLAAPPPPGYIPIPRRRVLKNLEINGGQRINAWVDSMRASSPTNSKSTSSLAEEHSSWILRHPSALDMFEQIMDASRGKQIVMFLDYDGTLSPIVDDPDHAFMSDSMRRTVRKLARCFPTAIVTGRCKDKVYSFVRLAELYYAGSHGMDIQGPTRDCKYSKDKGEPVLFQPASEFLPMIDEVHQQLVEKMKSIPGAKVENNKFCCSVHFRCVDEKKWSELAQEVRSVLKEYPKLRLNQGRKVLEIRPSIKWDKGKALEFLLESLGFANCNDVFPVYIGDDKTDEDAFKKLRDRGQGSGILVSKFPKDTSASYSLQEPNEVMDFLQRLVEWKQVSLRLRTRSRV* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1159 366 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 8 363 - -
Gso8g1159 366 Gene3D - 200 363 IPR023214 -
Gso8g1159 366 Gene3D - 104 188 IPR023214 -
Gso8g1159 366 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 106 316 IPR006379 -
Gso8g1159 366 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 8 363 IPR044651 GO:0004805|GO:0005992
Gso8g1159 366 TIGRFAM T6PP: trehalose-phosphatase 102 351 IPR003337 GO:0003824|GO:0005992
Gso8g1159 366 SUPERFAMILY HAD-like 105 353 IPR036412 -
Gso8g1159 366 Pfam Trehalose-phosphatase 107 340 IPR003337 GO:0003824|GO:0005992
Gso8g1159 366 CDD HAD_TPP 105 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1159 Gso-Chr8 10608723 10611583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1159 93 350 Trehalose Biosynthesis Gene Families AT1G60140 28.520 1.97e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1159 K01087 - gmx:100788735 706.442