Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1125 ATGGAACGGTATGAGATAATTAAAGATATTGGGTCAGGAAACTTTGGTGTGGCAAAGCTGGTCAAGGAAAAATGGAGTGGTGAATTATATGCTATCAAGTTCATTGAGAGAGGCTTCAAGATTGATGAACACGTGCAAAGAGAGATTATAAATCATAGGTCCTTGAAGCATCCCAATATCATTAGATTTAAAGAGTTGTTGCTTACTCCAACTCATCTTGCAATAGTCATGGAATATGCTTCCGGGGGAGAACTGTTTGAAAGAATATGCAGTGCTGGGAGATTCAGTGAGGACGAGGCGAGATATTTCTTTCAGCAACTGATTTCTGGAGTCAGCTATTGCCATTCAATGGAAATTTGCCACAGAGATCTTAAGCTGGAAAACACACTTCTAGATGGAAGCTCAGCACCACGACTTAAAATCTGTGACTTTGGTTACTCAAAGTCATCTGTTTTGCACTCCCAGCCAAAATCAACGGTAGGAACCCCTGCCTATATTGCACCAGAGGTTTTGTCAAGAAGAGAATATGATGGGAAGGTCGCGGATGTTTGGTCTTGTGGGGTGACCTTATATGTGATGTTGGTTGGAGCATATCCTTTTGAAGACCCAGAAGACCCAAGAAACTTCAGAAAAACACTTCAGCGAATTCTTAGTGTCCACTATTCAATTCCAGACTATGTACGAATCAGTAAAGAGTGTAGGCACCTTTTGTCTAGAATATTTGTGGCCAACCCGGAAAAGAGAATTACCATACCAGAGATTAAAATGCACCCTTGGTTCCTAAAGAATTTGCCACTAGAATTTATGGACGAGGGCGAAGGGGTGTTGCAGAATGATGATCATGTGAATGAAGAGTCATCTGAAATCACTCAAAGCATTGAAGAAATACTGGCCATAGTTCAAGAGGCTAGGAAACCGGGTGAGGGCCCAAAAGTTGGTGAGCAATTTGTTGGGGGCAGCATGGACCTCGATGATATTGATGCGGATGCTGACATCGATGACATTGAGACAAGCGGTGATTTTGTCTGTGCATTGTGA 1038 0.4229 MERYEIIKDIGSGNFGVAKLVKEKWSGELYAIKFIERGFKIDEHVQREIINHRSLKHPNIIRFKELLLTPTHLAIVMEYASGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSSAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTLQRILSVHYSIPDYVRISKECRHLLSRIFVANPEKRITIPEIKMHPWFLKNLPLEFMDEGEGVLQNDDHVNEESSEITQSIEEILAIVQEARKPGEGPKVGEQFVGGSMDLDDIDADADIDDIETSGDFVCAL* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1125 345 Gene3D Transferase(Phosphotransferase) domain 1 80 266 - -
Gso8g1125 345 SUPERFAMILY Protein kinase-like (PK-like) 2 266 IPR011009 -
Gso8g1125 345 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1125 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Gso8g1125 345 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Gso8g1125 345 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 2 339 - -
Gso8g1125 345 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1125 345 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1125 345 CDD STKc_SnRK2 3 259 - -
Gso8g1125 345 PANTHER SERINE/THREONINE KINASE 2 339 - -
Gso8g1125 345 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1125 Gso-Chr8 10340903 10344092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1125 3 270 CBL-interacting serine-threonine protein kinases AT4G24400 43.321 1.27e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gso8g1125 Pkinase 3.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1125 K14498 - gmx:100807981 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1495 5 38416689 38419836 Gso8g1125 8 10340903 10344092 GST