Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1118 ATGGGAAGAACCAAAGTCTCCACCCTCTTTGCCAATAGCCATAACAACAATTACATGCCTCCTTATTCCAACACCATTAGACAAACTCTTTTACTATTATATTATATACTAAGTACTAAGGTTTTTTTTTTTTTTTTCTACTTATCTGGGTTGAGTTCAATTGTAGGAAAAGTTGATGGGGACTCAAAAACTGAGGAAGAGGAGAAAGTCTACTCTTGGTTATACACCCTGGCTCAGTCTCACAAAAACTTGGTCTTCGAGTACGTTAGATCCACTGAGAGAGGCTTAAGTTTCACAGAAGCCGATAGGAGACTGAGGGAAAATGGGCCAAATGTTCCACTTGAGTATTCCTTTCCAAGATGGTGGCATCTTCTATGGAACGCTCTTTTCCATCCTTTCATTATCACTCTGATTGTTTTGTCAGCTCTGTCATTCATTACCTGTGACAGTCCAAATGGGTTTATCATGCTCATATTGGTTATCATCAGTGTCACCCTTCGTTTCTATCAGGAATACAGCAGCTCAAAAGCAGCAATGAAGCTTTCAGAATTTGTAAAATGTCCAATAAAAGTTCAAAGATGCGCCGGTAGAGTTGTTCAGAAAGAACTTGTAGTTCAAGTTGATCAGAGAGATGTAGTTCCAGGTGACATTGTGATTTTTGAACCTGGTGACCTCTTTCCAGGAGATATCAGGTTGTTATCTTCTAAACAACTTGTTGTAAGCCAGGCATCACTAACAGGGGAATCTTGGACAACTGACAAAACTGCTGAAATCAGAGAAGATCACAGCACTCCTTTATTGGATTTGAAGAACATCTGCTTTATGGGCACAAGCGTGGTATCTGGTACTGGAACAGGCCTAGTGATTTCCACTGGATCCAATACTTACATGAGCACCATGTTTTCAAAAGTTGGGAAGAAGAAGCCACCAGATGAATTTGAAAAGGGTCTCAGACGGATATTTTACTTGCTTATTTCTGTCATTCTAGTAGTTGTTACCATCATGTTTGTGATAAATTACATTACATCTCTTAATTTGAGCCAAAGTGTTCTTTTTGCCATCTCAGTTGCATCTGCCCTCAATCCTCAGATGCTTCCCCTCATCATTAACACATGTCTTGCAAAAGGAGCACTTGCTATGGCTAAAGACAGATGTATAGTAAAAAGTTTAACATCTATACGCGACATGGGATCAATGGATATTCTTTGTATTGATAAGACAGGCACCCTTACAATAAATCACGCAATCATGGTTAATCATCTTGACTGCAGGGGTTTACCCCAAGAAAAAGTCTTACGCTATGCCTTTTTCAACTCTTACTTTAAGAGTGATCAGAAGTATCCTCTGGATGATGCAATTCTGGCATTTGTATATTCAAATGGATTCAGGTTTCAGCCATCTAAGTGGAGGAAGATAGATGAGATTCCTTTTGACTTCATAAGAAGAAGAGTATCTATCATCTTAGAAACAGAAGACAAACACTCACAATTCTTTGGCAGGTTCCTGGTAACAAAAGGAGCACTGTTAGAAGTATTGAGAGTTTGTTCTTTCATTGAGAATTTCGATAAAGATGAAATTTCGCCCTTCTCTTCAGATGATTATCAGCGGATTTTAAATCTCTCAGAAGATTTGAGCAATGAGGGGTTAAGGGTTATAGCAGTAGCTATAAGGAAGCTGAAAATGCCGCAAAAATGCGAAACAAGTAATGGAAGCAAAAGAGAAGAGGAGGATATTGAAAGAGACATGATGTTCCTTGGCCTCATAACATTTTTCGACCCACCAAAGGACTCAGCAAAGCAAGCACTGCGGCGTTTGTCTGAGAAGGGAGTGAAGGCAAAGGTTTTAACTGGTGACTCCCTCTCCTTGACAACAAGGGTATGCAGGGAAGTTGGCATAAGCACCACTCATGTAATAACAGGTCCCGAACTAGAGCAACTTGACCAAGACACTTTCCATGAAACAGTTCAAAGAGCCACAGTACTAGCCCGTCTCACCCCAATTCAGAAACAACGAGTGGTGCAATCCTTGCAAACAAGTGAAAACCACGTTGTTGGGTTCTTAGGAGATGGAGTGAACGATTCACTAGCCTTAGATGCTGCCAATGTAAGCATTTCAGTGGACTCAGGTGTAGCCATTGCCAAAGACATGGCTGATATTATCTTACTTGAGAAAGACCTCAACGTGCTTGTTGCAGGAGTGGAGCATGGTAGAATCTCTTTTGGCAACACAATGAAGTATGTAAAGATGTCAGTGATAGCTAACTTGGGAAGTGTCATTTCACTCCTCATTGCAACACTTTTATTCAAGTATGAGCTCTTAACTTCTAGACAGCTTCTTACTCAGAATTTCATCTACAGTGTGGGACAGATTGCCATTGCTTGGGACAAAATGGATGAAGAGTATGTTAAGACACCTCACAAGTCCTCAGAGAGAGGCTTGTCCATGTTCATATTGTGGAATGCACCAGTGTGCACCCTTTGTGATGTGGCAACACTTTTGCTTCTTCGGTTATATTACAAGGCTTATACCGATGTGACTCGAAAGTTTTTCCATTCTGCTTGGTTCGTTGAAGGTCTTCTATTGCAGACCCTCATCATCCATTTGATAAGGACAGAGAAAAATCCTTTCATACAGGATGTTGCATCTTGGCCTGTGATTTTCTCCACTGTTGTGACATCTGCAATTGGAATTGCACTTCCATTCACACTCATTGGGAAGATCTTGGGATTCTCCGTTATACCTATCTCATATTTCGGATTTTTGGTGCTTCTTTTTCTGGGGTATTTTGCAGTTGGCCAAGTGGTTAAGAGACTTTACATATTGGTTTATAAGAGATGGCTTTGA 2844 0.4044 MGRTKVSTLFANSHNNNYMPPYSNTIRQTLLLLYYILSTKVFFFFFYLSGLSSIVGKVDGDSKTEEEEKVYSWLYTLAQSHKNLVFEYVRSTERGLSFTEADRRLRENGPNVPLEYSFPRWWHLLWNALFHPFIITLIVLSALSFITCDSPNGFIMLILVIISVTLRFYQEYSSSKAAMKLSEFVKCPIKVQRCAGRVVQKELVVQVDQRDVVPGDIVIFEPGDLFPGDIRLLSSKQLVVSQASLTGESWTTDKTAEIREDHSTPLLDLKNICFMGTSVVSGTGTGLVISTGSNTYMSTMFSKVGKKKPPDEFEKGLRRIFYLLISVILVVVTIMFVINYITSLNLSQSVLFAISVASALNPQMLPLIINTCLAKGALAMAKDRCIVKSLTSIRDMGSMDILCIDKTGTLTINHAIMVNHLDCRGLPQEKVLRYAFFNSYFKSDQKYPLDDAILAFVYSNGFRFQPSKWRKIDEIPFDFIRRRVSIILETEDKHSQFFGRFLVTKGALLEVLRVCSFIENFDKDEISPFSSDDYQRILNLSEDLSNEGLRVIAVAIRKLKMPQKCETSNGSKREEEDIERDMMFLGLITFFDPPKDSAKQALRRLSEKGVKAKVLTGDSLSLTTRVCREVGISTTHVITGPELEQLDQDTFHETVQRATVLARLTPIQKQRVVQSLQTSENHVVGFLGDGVNDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRISFGNTMKYVKMSVIANLGSVISLLIATLLFKYELLTSRQLLTQNFIYSVGQIAIAWDKMDEEYVKTPHKSSERGLSMFILWNAPVCTLCDVATLLLLRLYYKAYTDVTRKFFHSAWFVEGLLLQTLIIHLIRTEKNPFIQDVASWPVIFSTVVTSAIGIALPFTLIGKILGFSVIPISYFGFLVLLFLGYFAVGQVVKRLYILVYKRWL* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1118 947 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 398 594 IPR023299 GO:0000166
Gso8g1118 947 Pfam Cation transporter/ATPase, N-terminus 88 144 IPR004014 -
Gso8g1118 947 Gene3D - 400 724 IPR023214 -
Gso8g1118 947 SUPERFAMILY HAD-like 578 735 IPR036412 -
Gso8g1118 947 TIGRFAM ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 67 946 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gso8g1118 947 Gene3D - 152 898 - -
Gso8g1118 947 Gene3D - 187 291 - -
Gso8g1118 947 SFLD Haloacid Dehalogenase 385 737 - -
Gso8g1118 947 SFLD p-type atpase 385 737 IPR044492 -
Gso8g1118 947 SMART Cation_ATPase_N_a_2 76 149 IPR004014 -
Gso8g1118 947 Gene3D - 415 591 IPR023299 GO:0000166
Gso8g1118 947 Pfam haloacid dehalogenase-like hydrolase 399 701 - -
Gso8g1118 947 PANTHER CATION TRANSPORTING ATPASE 55 946 - -
Gso8g1118 947 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 156 442 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso8g1118 947 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 653 766 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso8g1118 947 PANTHER MAGNESIUM-TRANSPORTING ATPASE, P-TYPE 1 55 946 - -
Gso8g1118 947 Pfam E1-E2 ATPase 197 382 - -
Gso8g1118 947 PRINTS Magnesium-transporting ATPase signature 316 332 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gso8g1118 947 PRINTS Magnesium-transporting ATPase signature 333 352 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gso8g1118 947 PRINTS Magnesium-transporting ATPase signature 437 450 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gso8g1118 947 PRINTS Magnesium-transporting ATPase signature 745 760 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gso8g1118 947 PRINTS Magnesium-transporting ATPase signature 795 808 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gso8g1118 947 PRINTS Magnesium-transporting ATPase signature 815 831 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gso8g1118 947 PRINTS Magnesium-transporting ATPase signature 850 871 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gso8g1118 947 PRINTS Magnesium-transporting ATPase signature 900 921 IPR006415 GO:0015444|GO:0015693|GO:0016021
Gso8g1118 947 SUPERFAMILY Calcium ATPase, transmembrane domain M 90 944 IPR023298 -
Gso8g1118 947 ProSitePatterns E1-E2 ATPases phosphorylation site. 405 411 IPR018303 -
Gso8g1118 947 SUPERFAMILY Calcium ATPase, transduction domain A 197 302 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1118 Gso-Chr8 10247290 10252463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1118 94 810 Primary Pumps ATPases(2) AT1G10130 26.316 7.84e-66 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1118 K01531 - gmx:100795153 1699.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1488 5 38297868 38303432 Gso8g1118 8 10247290 10252463 GST