Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1109 ATGTCCAAACCCTGGGGCAACATCGGAGCCTGGGCCGCCGATTCCGAGCGGGCCGAAGCCGAAGAGGCCGAGGCCCAGGCTGCGGCCGCGGCGGTTGAGCCCCAAAGCTTTCCCAGCCTCAAGGAGGCCGTGAACTCCAAGCCCAAGAAGAAGAAGGGAACCACCATCACGCTTTCCGAGTTCAACCGTGGCGGTTTCGACCAGGGCCTTACGCGCGACGAGATGCTCACCCTTCCGACCGGGCCCAAGGAGCGTTCCGCCGAGGAAATGCAGTTCAACCGCCTCGGCGGCGGTTTCTCCTCCTACGACCGCTCCGGCGGTCGCTCGCGCGACCGCGACGGTGGCAACAACGAAGGTTCGTGGGGCGGAGGAGGCAGAAGATCCTACGGTGGATTCGACGAGGAGCGCAGGGGTCCGAATCCTAGGGTTTCGGAACTCGATCAGCCGTCCAGGGCTGATGAGGTTGATAATTGGGCGTCCGTGAAGAAATCTCTCCCTGCCTACGATTCCGGTCGCCAGAATCGCTATGGTGGTGGCGGAGGCGGCGGTTTTGGTGGTAGTTCTGGTGGTGGTGGTTTTGGTGGTGGCGGCGGTTTTGGTGGTGGTGGTGGTGGGGGCGGATTTGGAGGCGCGTCTAGGGCTGATGATGTGGACAATTGGGCGGTTGGTAAGAAGCCTGCTCCTGTTAGATCTTCCAATTTCGGTTCCAGTTTTCGCGATTCCGGCGTGGAGCCTGATCGTTGGACGAGAGGGGATCCGCCGCGTGAGGTTGAGCAGCGGACGGAGAGGCCAAGGCTGGTGTTGGATCCGCCTCGAGGCGATGGTTTGGTGAATGAGTCTCCGGTGAAGGCGATGAATAAGGCGAATCCGTTTGGGGCGGCGAGGCCGCGGGAGGAGGTGTTGGCTGAGAAGGGTTTGGATTGGAAAAAGCTGGATTCGGAGATTGAGACTAAGAAGACGAGCCGTCCCACGAGTTCGCACTCTAGCAGGCCTTCCAGTGCTCAGTCCAATCGTTCTGAGGGTCCCGGGTTGCAGGGGACCGATGCTGTGGTTAAATCCAGGCCCAAGGTGAACCCCTTTGGGGATGCCAAGCCTAGGGAGGCTGTGCTGGGCGAGCGAGGCATGGATTGGAGGAAAATTGATCTTGAATTGGAGCGTCGCTCTGTTGCCAGGCCTGAGACAATGGAGGAAAAATTATTAAAAGAAGAAATTGATAATTTAAAGAAGGAACTTGAGAAAGAGTCTACAATAAATTCAAATAAGGAATCTGTGGATGAGGCTGGTGGAGACCAAACCAGTAGACATGCAATATTACAACAGAAAGAAAAGGAGCTGGAACTTCTTATCCATGATTTGGACGGCAAAGTTCGTTTTGGGCAGAAAGCCGTTGAAAGGCCAGGTTCATCGGCAGGGAAGTCTTCTACTTTTTCTGATCGGCCACCTTCTAGATCTGGTTCCTTTGAGGATTCTAGAAGTGTGGATTTTACAGACAGACCTCGATCTCGTGGTACAGGAGATATGTGGATGCGTCCTAGTGATGACAGAAGACAGTTTCAAGGTGGTAGCAGGGAAAGGGGATGGTTTTCTTCTGGCAGCAGAAATAGGTCAACGTCAAGAGAGAGATGGTGA 1629 0.5568 MSKPWGNIGAWAADSERAEAEEAEAQAAAAAVEPQSFPSLKEAVNSKPKKKKGTTITLSEFNRGGFDQGLTRDEMLTLPTGPKERSAEEMQFNRLGGGFSSYDRSGGRSRDRDGGNNEGSWGGGGRRSYGGFDEERRGPNPRVSELDQPSRADEVDNWASVKKSLPAYDSGRQNRYGGGGGGGFGGSSGGGGFGGGGGFGGGGGGGGFGGASRADDVDNWAVGKKPAPVRSSNFGSSFRDSGVEPDRWTRGDPPREVEQRTERPRLVLDPPRGDGLVNESPVKAMNKANPFGAARPREEVLAEKGLDWKKLDSEIETKKTSRPTSSHSSRPSSAQSNRSEGPGLQGTDAVVKSRPKVNPFGDAKPREAVLGERGMDWRKIDLELERRSVARPETMEEKLLKEEIDNLKKELEKESTINSNKESVDEAGGDQTSRHAILQQKEKELELLIHDLDGKVRFGQKAVERPGSSAGKSSTFSDRPPSRSGSFEDSRSVDFTDRPRSRGTGDMWMRPSDDRRQFQGGSRERGWFSSGSRNRSTSRERW* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1109 542 MobiDBLite consensus disorder prediction 459 542 - -
Gso8g1109 542 Coils Coil 13 33 - -
Gso8g1109 542 MobiDBLite consensus disorder prediction 297 323 - -
Gso8g1109 542 MobiDBLite consensus disorder prediction 490 521 - -
Gso8g1109 542 MobiDBLite consensus disorder prediction 129 158 - -
Gso8g1109 542 MobiDBLite consensus disorder prediction 467 489 - -
Gso8g1109 542 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 542 - -
Gso8g1109 542 Pfam Plant specific eukaryotic initiation factor 4B 1 526 IPR010433 GO:0003743
Gso8g1109 542 MobiDBLite consensus disorder prediction 1 23 - -
Gso8g1109 542 MobiDBLite consensus disorder prediction 411 438 - -
Gso8g1109 542 MobiDBLite consensus disorder prediction 324 343 - -
Gso8g1109 542 Coils Coil 397 417 - -
Gso8g1109 542 MobiDBLite consensus disorder prediction 243 269 - -
Gso8g1109 542 MobiDBLite consensus disorder prediction 39 374 - -
Gso8g1109 542 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 542 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1109 Gso-Chr8 10173823 10180388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1109 1 542 Eukaryotic Initiation Factors Gene Family AT3G26400 54.674 1.27e-148 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1109 - - gmx:100803366 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1481 5 38234103 38238943 Gso8g1109 8 10173823 10180388 GST