Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1085 ATGTTAGACACTGCTGAGCGTGATTCTGAGGTGAGTTTGGAGACCGTCTATTCTTCCACACTTGGAAGCTCAATGAGCAGCGAGAGCATTTGTAGCACCAGTTTCAGCCGTCTTTCCTTCGATCTCCTCCCTCCCTCTCCCGAGACTCTCTCCATCAAGCCTCACCGCTCCTCCGACTTCGCCTACTCCGCCGCCTTCCGCCGCAAGGCCGCACTTACCTTCCGCGACTTCCACCTCCTCCGCCGCATCGGCGCCGGCGACATCGGCACCGTCTACCTATGCCGCCTCCACAACAGCAACCAATTGAAGAATCAGGATGAAGACGAAGAAGATGTTTCTTGTTTATACGCCATGAAAGTGGTGGACAAAGACGCAGTGGCATTGAAGAAGAAGTCGCAGAGAGCGGAAATGGAGAAAAAAATCCTCAAGATGCTCGACCACCCGTTCCTCCCTACGCTCTACGCCGAGTTCGAAGCTTCTCATTTCTCTTGCATCGTCATGGAGTTTTGTTCCGGTGGAGACTTGCACTCCCTGCGCTTCAAGCACCCTCACAACCGTTTCCCTCTCTCCTCCGCAAGATTTTATGCGGCGGAGGTGCTGGTGGCGTTGGAATACCTCCACATGCTGGGAATCATCTACAGAGATTTAAAGCCTGAGAACGTGTTGGTTAGATCAGACGGTCACATCATGCTTTCTGATTTCGATCTTTCTCTTTACTCAGAGGCAATCCCAGCCGTTGAATCCTCCCCAGATTCCTTACCATCTTCAAACGCATTACCATTACCTTACGCTTACACTCGCTCGCATTCTTTTATGAGTCCATTCTCCTGCTTCTCAAACCGGTCGCGCGAGGTTCGAACTATTGAACCGAATCGGCTTTTTGTTGCCGAACCGGTTTCGGCTCGGTCCTGTTCCTTTGTTGGGACCCACGAGTACGTCTCGCCGGAGGTCGCTTCTGGCCGGTCGCACGGGAACGCCGTGGACTGGTGGTCGTTTGGAGTATTTATCTACGAGCTCATCTACGGTCGCACGCCGTATGCGGGTCCATCGAAAGAGGCTACGCTGCGGAACATCGTAAAGAAACCACTGGCGTTCCCCACGGCCACACCAACGAGCAATCTTGAACTGCACGCGCGGGATTTGATATCCGGCTTGCTGAACAAGGATCCGGCGCGCCGGCTCGGCTCGAAGCGCGGCGCCGCTGACGTCAAAAAGCACCCCTTCTTTAAAGGGCTCAACTTGGCGCTGATTCGCATGCAGACGCCGCCCGAAGTGCCTGGCTCCAGAAGAAGGACCAAAACGACGTCGCTGTACCCCGTGAAGGGTAACGGCAACAACAACCATAAACAACAACAGACGGCGTCGTTTGATTTTTACTTCTAA 1383 0.5387 MLDTAERDSEVSLETVYSSTLGSSMSSESICSTSFSRLSFDLLPPSPETLSIKPHRSSDFAYSAAFRRKAALTFRDFHLLRRIGAGDIGTVYLCRLHNSNQLKNQDEDEEDVSCLYAMKVVDKDAVALKKKSQRAEMEKKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRFKHPHNRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLYSEAIPAVESSPDSLPSSNALPLPYAYTRSHSFMSPFSCFSNRSREVRTIEPNRLFVAEPVSARSCSFVGTHEYVSPEVASGRSHGNAVDWWSFGVFIYELIYGRTPYAGPSKEATLRNIVKKPLAFPTATPTSNLELHARDLISGLLNKDPARRLGSKRGAADVKKHPFFKGLNLALIRMQTPPEVPGSRRRTKTTSLYPVKGNGNNNHKQQQTASFDFYF* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1085 460 Pfam Protein kinase domain 77 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1085 460 Pfam Protein kinase domain 303 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1085 460 SMART serkin_6 77 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1085 460 Gene3D Phosphorylase Kinase; domain 1 75 169 - -
Gso8g1085 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Gso8g1085 460 MobiDBLite consensus disorder prediction 436 460 - -
Gso8g1085 460 SUPERFAMILY Protein kinase-like (PK-like) 62 426 IPR011009 -
Gso8g1085 460 Gene3D Transferase(Phosphotransferase) domain 1 170 237 - -
Gso8g1085 460 Gene3D Transferase(Phosphotransferase) domain 1 302 427 - -
Gso8g1085 460 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 460 - -
Gso8g1085 460 PANTHER FLIPPASE KINASE 1-RELATED 1 460 - -
Gso8g1085 460 ProSiteProfiles Protein kinase domain profile. 77 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1085 Gso-Chr8 10036795 10038553 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1085 6 459 AGC Kinase Gene Family AT2G34650 64.783 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso8g1085 Pkinase 6.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1085 - - gmx:100815648 903.664