Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1062 ATGCCACAAAATGTTGGTTTAATAAAAAACAAAGTTTCCAACTTTACCAAACTAATAAATATTATGGAGTCCATTTTTGTGATTCTTCTGATCTTTATGGTGGCATCAAATCCATGCTCTGCGGCGCCTTCTCCTTCTCCCTCTGCCTCTCCCACCATTTCCACTACCAACAGTTCCACATGCCCAGTGTCCATGAATTATGTGCAAACAGTCCCTTGGAACAGCTCTTCCTGCCAAAACTTCCAACCCTTGGCATCACAATACCAAACAAAAACAAGTCCTTGTTGCCAAACTCTGCTATCCCTCTTTGGAATAGCACTTTCACAAAACCTCAAAAAAAGCTCTCTTTTCCAACTCCCTAACCTCCCTACCTCCAGCTCTTGTCTTCAACACTTCCAATCCAACCTCACATCTCTCTCACTTCCCAACAACCTTGTCTCCTCCTGCTTTGATCCATCTCAATTTGTCATCTCTCCAAACATCTGTGCTGGTATTCAAAATATTGAAGATTGGCACACTAGGCTTGGTCCTACACCAGAGCTCAACACTGCCTGTGGACCAGACCTCACTGACCCTAACCAATGCAGAACGTGTGTGGCTGAGGGGGACAAGGTTCAGCAGAGGCTTCTTTCTATTGATGGTAATGATTCACATTCCCTAGATTGCTTTTACTTCGCAACACTTTACCTGGCTGGAGTTGTCAATGAGCTTGGCCCTGAAAGCAAAGGTGTTATGTCTTGCATTTTGATTCTGTTGCTTAATTCACAAGTTGATTCAAGGGATGGCCATTATGCTCTTGTGTTGGGGTTAATTTTAGCTTCACTTGCATTCCTGGTAATCATATTAGGATTAGGATTTTATTGTTGGTACACAAAGAAAAGAAAAGTGGAAAATTTGCTAGCCTATGCTGATCTACAGGAACAAAGCTTCAGCCTAAGGCTGAGGCCAAATGCAGTGTTAACTTGGTTTGAATTTGAGGACCTTATGAGGGCCACCGACAATTTTTCACCTCAGAACTTCATTGGAAGAGGTGGGTTTGGGTTGGTTTACAAGGGCATTCTACCTGATGGCTCAATGGTTGCTGTGAAAAGGCTTGAAGAATCAGATTCTCAAGGTGATGCTTTGTTCTGCAGTGAGGTGGAGATTGTTAGCAACTTGAAGCACCGAAATCTGGTACCGCTAAAAGGGTGTTGTGTGGTTGATGAGGGGAATGAGAATCACAATTTTGAGTACAGAAGAAGGTATCTAGTTCATGAATATATGCCAAATGGTAGCCTTGAAGACCATCTCTTTCCAACCAAACTAGACAATCAAAATACAAAAAAGTCCCTTACTTGGTCTCAAAGGAAAAGCATAATCTTGGATGTGGCAAATGCTTTGGTTTATTTGCACTTTGGAGTTCAACCTGCAGTTTTTCACAGAGATATCAAAGCCACCAATATACTACTTGATGCAGATATGAGAGCAAGGGTTGGAGATTTTGGGCTAGCCAGACAGAGCAGTGAAAGTAGGTCACAGCTAAATACTAGAGTAGCAGGAACTCGCGGATACGTGGCACCTGAATATGCACTTTATGGTCAGCTAACTGAGAAGAGTGATGTCTATAGCTTTGGTGTGGTTATTCTTGAGATAATGTGTGGAAGAAAAGCCCTTGAATTGTCTCCATCAGGAACACCAATTTTCTTGATCACAGATTGTGTTTGGTCATTGATGAAATCTGGAAACATAGGAGAGGCTTTGGATGCTTCTATGTTAGGAGATGAAAATTGTGCTAGAAACATAATGGAGAGGTTTTTGCTGGTTGGAATTCTTTGTTCTCATGTAACGGTTGCTTCAAGGCCAACAATTTTGAATGCTTTGAAGATGTTAGAAGGGGATATTGAGGTCCCACCAATTCCAGATAGGCCACTGAGTCATGGGAACTATGTGTTGTACAGTGGTGATTGCTCTGGGATGAGCTCAGGATGTGGATTTGTGAGCTCATGA 1986 0.423 MPQNVGLIKNKVSNFTKLINIMESIFVILLIFMVASNPCSAAPSPSPSASPTISTTNSSTCPVSMNYVQTVPWNSSSCQNFQPLASQYQTKTSPCCQTLLSLFGIALSQNLKKSSLFQLPNLPTSSSCLQHFQSNLTSLSLPNNLVSSCFDPSQFVISPNICAGIQNIEDWHTRLGPTPELNTACGPDLTDPNQCRTCVAEGDKVQQRLLSIDGNDSHSLDCFYFATLYLAGVVNELGPESKGVMSCILILLLNSQVDSRDGHYALVLGLILASLAFLVIILGLGFYCWYTKKRKVENLLAYADLQEQSFSLRLRPNAVLTWFEFEDLMRATDNFSPQNFIGRGGFGLVYKGILPDGSMVAVKRLEESDSQGDALFCSEVEIVSNLKHRNLVPLKGCCVVDEGNENHNFEYRRRYLVHEYMPNGSLEDHLFPTKLDNQNTKKSLTWSQRKSIILDVANALVYLHFGVQPAVFHRDIKATNILLDADMRARVGDFGLARQSSESRSQLNTRVAGTRGYVAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALELSPSGTPIFLITDCVWSLMKSGNIGEALDASMLGDENCARNIMERFLLVGILCSHVTVASRPTILNALKMLEGDIEVPPIPDRPLSHGNYVLYSGDCSGMSSGCGFVSS* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1062 661 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 54 640 - -
Gso8g1062 661 Pfam Protein kinase domain 338 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1062 661 SMART serkin_6 335 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1062 661 Gene3D Transferase(Phosphotransferase) domain 1 421 629 - -
Gso8g1062 661 Pfam SPARK 56 223 IPR043891 -
Gso8g1062 661 Gene3D Phosphorylase Kinase; domain 1 298 420 - -
Gso8g1062 661 SUPERFAMILY Protein kinase-like (PK-like) 314 624 IPR011009 -
Gso8g1062 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Gso8g1062 661 ProSiteProfiles Protein kinase domain profile. 335 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1062 661 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Gso8g1062 661 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 54 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1062 Gso-Chr8 9830175 9834226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1062 53 644 Receptor kinase-like Gene Family AT1G11050 55.426 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Gso8g1062 Pkinase 5.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1062 - - gmx:100788367 1277.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0393 15 3631328 3634063 Gso8g1062 8 9830175 9834226 PCT
Gso8g1553 8 15105573 15108897 Gso8g1062 8 9830175 9834226 PCT