Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1059 ATGGAGAAGTACGAGATAGTGAATGAGGAGATAGGGATTGGGAGAGACGCGGTCGTAAGACTTATGCGTTGCAAAGAAACTAAGGATCTCGTTGCCGTCAAATACATCCCACGGGAAGACAGGATTATTGATGAGAAGGTGGCAAGGGAAATCATAAACCTTAGATCTCTTCGTCATCCGAATATTGTTCAGTTCAAGGAGGTGGCTTTGACTCCAACGCATCTTGCAATAGTTATGGAGTATGCAGCGGGTGGAGAGCTGTATAACCGAGTTTGCAACGGAAGAATACGTGAAGACGAGGCTCGATATTTCTTCCAGCAGTTGATTTCAGGAGTTAGTTATTGCCACGACAAGGAAATATGTCATCGAGACTTGAAGTTGGAGAATACTTTATTGGATGGAAGCCCTGCTAATCGCCTTAAAATTTGTGATTTCGGCTATTCTAAGTCATACCTACTTCATTCGAGACCCCATTCAGTGATTGGAACTCCAGCCTATATTGCACCAGAGGTTCTTTCCGGGAAAGATTACGATGGAAAGTTGGCAGATGTATGGTCCTGTGGAGTGATACTTTATACAATGTTGGTAGGAGCATTGCCATTTGAGGACATAAAGGATACCGAAAATTTCCAGAAAACCATAAAACGAGTTATGGCTGTTCAATACAAGTTCCCTGAAAGAGTTTACATATCTCAAGACAGTAAAAATCTGATATCTCGCATTTTTGTGGCAAATCCAGCAATGAGAATCACCATGAAGGAAATCAAGTCACATCCTTGGTTTTTAAAGAACTTGCCTAAGGAATTGAGAGACGGGGCTCAAGATGTCTACTACAATGAAGAAAATACAAAATATCCTCTTCAAAGTATAGAAGAGATCATGAACATTGTCAACGAGGCCAAAACTACAACTGCAACTTCCAGTCCATATCTATAG 936 0.4124 MEKYEIVNEEIGIGRDAVVRLMRCKETKDLVAVKYIPREDRIIDEKVAREIINLRSLRHPNIVQFKEVALTPTHLAIVMEYAAGGELYNRVCNGRIREDEARYFFQQLISGVSYCHDKEICHRDLKLENTLLDGSPANRLKICDFGYSKSYLLHSRPHSVIGTPAYIAPEVLSGKDYDGKLADVWSCGVILYTMLVGALPFEDIKDTENFQKTIKRVMAVQYKFPERVYISQDSKNLISRIFVANPAMRITMKEIKSHPWFLKNLPKELRDGAQDVYYNEENTKYPLQSIEEIMNIVNEAKTTTATSSPYL* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1059 311 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1059 311 Gene3D Transferase(Phosphotransferase) domain 1 82 269 - -
Gso8g1059 311 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 307 - -
Gso8g1059 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Gso8g1059 311 PANTHER SERINE/THREONINE KINASE 2 307 - -
Gso8g1059 311 SUPERFAMILY Protein kinase-like (PK-like) 8 289 IPR011009 -
Gso8g1059 311 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Gso8g1059 311 Pfam Protein kinase domain 8 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1059 311 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1059 Gso-Chr8 9791476 9794981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1059 1 265 CBL-interacting serine-threonine protein kinases AT5G01810 44.891 5.16e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gso8g1059 Pkinase 1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1059 K14498 - gmx:100787825 622.468