Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1055 ATGGGCAAGACTCCTTTCTCCTTTCGTCGCTCCGCCTCTCGCCGCCGCCCCAAGAAGACCGCCGCCCCGCCCCCTCCTCCCTCTCCGCCGCAACATCCCTACGCGGCCGGATTCGCCGCCTCACCCGACGACAACAACCGTCTCATCGCCGCCGCCGCCGGCAGCAGCGCCTTGACGAAGGCGAAGAAGAAGACCGGCAACGTCCGCTTGTGGATGAGGTTTGACCGGTCCGGCCGGTCAGAACTGGTGGAGTTGGAGAAGAACGCCATCGTCCGCCACGCAGCGATTCCCGCTAGAGACTTGCGAATTTTGGGGCCCGTCTTCTCCCACTCCTCCAACATCCTCGCTAGAGAGAAAGCAATGGTGGTTAATTTGGAGTTTATAAAGGCAATTGTGACTGCTGAAGAAGTGTTATTGCTTGACCCTCTTCGGCAGGAGGTTCTTCCCTTTGTTGAGCAACTCAGGCAACAGCTTCCTGGCAAAAGTCAACCTAAACTTCTCGGCGGCACGGAAGAGCAGGAAGGCGAAATGCATGTCTCTAATGGAAGACAATGGTTGCCTACACCGGAGGCAGCCGATGGTTTGCAGTCTGAGCTTCCGTTTGAGTTTCAAGTTCTGGAGATTGCTTTGGAGGCTGTGTGTACTTATCTGGACTCGAATGTGGCGGACCTTGAGCGAGGTGCTTACCCTGTGTTGGATGAATTGGCTAGGAATGTTAGCACCAAGAATCTTGAGCATGTGCGGAGTTTGAAGAGTAATCTTACGCGGTTGCTGGCACGAGTGCAGAAGGTGCGAGATGAAATTGAACATCTGTTAGATGACAATGAAGATATGGCACAACTATATTTGACAAGGAAGTGGTTGCAGAATCAACAATTTGAGGAGGCTCATTTGGGTGCCACAACCTCAAATAACTTTCCTAATACCTCACGTTCTGTTCGTCAACTTGGTTCTATCAGAAGTGAAAGTCTTGTGACCAGCCATTATGAGGATGATAACAATGTGGAGGACTTGGAGATGTTGCTTGATGCATATTTCATGCAGTTGGATGGAACTCGTAACAAAATATTATCAGTTAGGGAGTATATTGACGACACTGAAGACTATGTCAACATCCAACTTGATAACCACCGAAATGAACTTATTCAGCTGCAGTTGACGTTGACTATTGCATCATTTGCTATTGCTATTGAAACTTTGATTGCTGGTGCATTTGGTATGAACATTCCTTGTAACTTATATAACATTGATGGAGTATTTTGGCCCTTCGTTTGGACCACGTCTGCGGCTTGCGTATTACTTTTCTTGCTTATTTTAGCATATGCAAGATGGAAGAAGTTGCTGGGATCATAA 1353 0.4878 MGKTPFSFRRSASRRRPKKTAAPPPPPSPPQHPYAAGFAASPDDNNRLIAAAAGSSALTKAKKKTGNVRLWMRFDRSGRSELVELEKNAIVRHAAIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPGKSQPKLLGGTEEQEGEMHVSNGRQWLPTPEAADGLQSELPFEFQVLEIALEAVCTYLDSNVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQQFEEAHLGATTSNNFPNTSRSVRQLGSIRSESLVTSHYEDDNNVEDLEMLLDAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAIETLIAGAFGMNIPCNLYNIDGVFWPFVWTTSAACVLLFLLILAYARWKKLLGS* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1055 450 MobiDBLite consensus disorder prediction 1 40 - -
Gso8g1055 450 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 386 438 IPR045863 -
Gso8g1055 450 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 5 450 - -
Gso8g1055 450 MobiDBLite consensus disorder prediction 19 33 - -
Gso8g1055 450 Pfam CorA-like Mg2+ transporter protein 326 443 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gso8g1055 450 Gene3D Magnesium transport protein CorA, transmembrane region 144 381 - -
Gso8g1055 450 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 450 IPR039204 -
Gso8g1055 450 CDD Mrs2_Mfm1p-like 71 447 IPR039204 -
Gso8g1055 450 Gene3D Magnesium transport protein CorA, transmembrane region 388 448 - -
Gso8g1055 450 Gene3D - 56 142 - -
Gso8g1055 450 Coils Coil 247 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1055 Gso-Chr8 9761208 9764196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1055 1 450 MRS2 Gene Family AT3G58970 65.198 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1055 K16075 - gmx:100786220 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1432 5 37792474 37795938 Gso8g1055 8 9761208 9764196 GST
Gso8g1055 8 9761208 9764196 Gso18g0101 18 827573 834902 PCT
Gso8g1055 8 9761208 9764196 Gso13g1521 13 30658844 30661485 PCT