Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1049 ATGGAAAGCATTGCCGCGCAGCTGAAGCGCGGCATCTCCCGGCAGTTCTCGTCGGGGTCGCTGCGGAGGAACCTCTCGCGCCAGTTCACTCGCCAAGCCTCTCTTGATCCCCGGCGTAACAACCAGCGCTTCAGCATCGGCCGCCAGTCCTCTCTCGATCCTATTCGCCGTAGCCCCGGCCCCGTCCAGCCCGAGCTCACCGTGCCCGAGAACCTGGACTCCACCATGCAGCTCCTCTTCATGGCCTGCCGCGGCGACGCCAAGGGAGTCGATGATTTGCTCAACGAAGGCATCGACGTCAACAGCATCGACCTCGACGGCCGCACCGCCCTCCACGTCGCCGCCTGCGAAGGCCACGTCGAAGTCGCCAGGCTCCTCCTCACCCGCAAGGCCAACCTCGACGCTCGCGATCGCTGGGGCAGCACCGCGGCCGCCGATGCCAAATATTATGGAAATACAGAAATTTATTACATGTTGAAGGCTCGGGGAGCGAAAGTGCCGAAAACCAGGAAGACTCCAATGACTGTTGCAAATCCTCGTGAAGTTCCGGAATATGAACTCAACCCGTTAGAGCTACAGGTTCGGAAGAGTGATGGTATTTCAAAGGGAACATACCAAGTAGCTAAATGGAATGGCACCAAGGTTGCAGTGAAGATACTTGATAAGGACAGTTATTCAGATCCTGATACCATAAATGCTTTCAAACATGAACTCACATTATTAGAAAGGGTGCGGCATCCGAATGTGGTCCAGTTTGTTGGAGCTGTCACCCAGAATATACCCATGATGATTGTGAGAGAGTACCATTCTAAGGGTGACCTGGCAAGCTATCTTCAAAAGAAAGGGCGCTTGTCTCCATCAAAAGTTCTACGGTTTTGTCATGATATTGCTAGGGGCATGAACTATCTTCACGAATGCAAACCAGATCCGGTTATTCACTGTGATTTAAAGCCAAAAAATATTTTGCTGGATAGTGGAGGGCAATTGAAGATAGCTGGATTTGGCACTGTGAGATTTTCACTAATTTCACCTGATGAAGCACAGCTGGTACAGCCTGAGCCTAACATTGATCTTTCAAGCTTGTATGTGGCACCGGAGATTTACAAAGATGAAGTTTTTGATAGAAGTGTGGATGCATATTCTTTTGGTCTCATTTTATACGAGATGATAGAGGGTACACAGCCCTTCCATCCGAAGTCCTCAGAGGAGGCAGTTAGACTGATGTGCTTAGAAGGGAAAAGACCAGCATTCAAGATCAAAACAAAACATTATCCTCCGGAGTTGAAAGAGTTGATTGAGGAATGTTGGGATCCAACACCTGTTGTGAGGCCAACATTTTCTCAGGTCATTGTACGGTTGGACAAAATTGTTGCAAATTGCTCAAAACAAGGATGGTGGAAAGATACTTTTAAACTCCCTTGGAAATAA 1428 0.493 MESIAAQLKRGISRQFSSGSLRRNLSRQFTRQASLDPRRNNQRFSIGRQSSLDPIRRSPGPVQPELTVPENLDSTMQLLFMACRGDAKGVDDLLNEGIDVNSIDLDGRTALHVAACEGHVEVARLLLTRKANLDARDRWGSTAAADAKYYGNTEIYYMLKARGAKVPKTRKTPMTVANPREVPEYELNPLELQVRKSDGISKGTYQVAKWNGTKVAVKILDKDSYSDPDTINAFKHELTLLERVRHPNVVQFVGAVTQNIPMMIVREYHSKGDLASYLQKKGRLSPSKVLRFCHDIARGMNYLHECKPDPVIHCDLKPKNILLDSGGQLKIAGFGTVRFSLISPDEAQLVQPEPNIDLSSLYVAPEIYKDEVFDRSVDAYSFGLILYEMIEGTQPFHPKSSEEAVRLMCLEGKRPAFKIKTKHYPPELKELIEECWDPTPVVRPTFSQVIVRLDKIVANCSKQGWWKDTFKLPWK* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1049 475 CDD STKc_MAP3K-like 200 453 - -
Gso8g1049 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Gso8g1049 475 Gene3D Transferase(Phosphotransferase) domain 1 271 469 - -
Gso8g1049 475 Gene3D - 32 185 IPR036770 -
Gso8g1049 475 ProSiteProfiles Protein kinase domain profile. 190 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1049 475 SUPERFAMILY Ankyrin repeat 75 175 IPR036770 -
Gso8g1049 475 SMART serkin_6 194 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1049 475 ProSiteProfiles Ankyrin repeat region circular profile. 106 138 - -
Gso8g1049 475 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 33 473 - -
Gso8g1049 475 MobiDBLite consensus disorder prediction 29 66 - -
Gso8g1049 475 Pfam Protein tyrosine and serine/threonine kinase 200 452 IPR001245 GO:0004672|GO:0006468
Gso8g1049 475 Gene3D Phosphorylase Kinase; domain 1 187 270 - -
Gso8g1049 475 ProSiteProfiles Ankyrin repeat profile. 106 138 IPR002110 GO:0005515
Gso8g1049 475 SUPERFAMILY Protein kinase-like (PK-like) 203 453 IPR011009 -
Gso8g1049 475 MobiDBLite consensus disorder prediction 29 52 - -
Gso8g1049 475 PRINTS Tyrosine kinase catalytic domain signature 266 279 IPR001245 GO:0004672|GO:0006468
Gso8g1049 475 PRINTS Tyrosine kinase catalytic domain signature 305 323 IPR001245 GO:0004672|GO:0006468
Gso8g1049 475 PRINTS Tyrosine kinase catalytic domain signature 377 399 IPR001245 GO:0004672|GO:0006468
Gso8g1049 475 PRINTS Tyrosine kinase catalytic domain signature 424 446 IPR001245 GO:0004672|GO:0006468
Gso8g1049 475 PIRSF ILK 8 474 - -
Gso8g1049 475 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 33 473 - -
Gso8g1049 475 SMART ANK_2a 106 135 IPR002110 GO:0005515
Gso8g1049 475 SMART ANK_2a 74 102 IPR002110 GO:0005515
Gso8g1049 475 Pfam Ankyrin repeats (many copies) 93 143 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1049 Gso-Chr8 9706240 9711716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1049 1 475 MAP Kinase Kinase Kinase AT2G31800 77.521 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Gso8g1049 PK_Tyr_Ser-Thr 4.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1049 - - gmx:100784109 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1426 5 37740492 37745740 Gso8g1049 8 9706240 9711716 GST