Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1040 ATGGGTAATTGCTGGTGTAGGTGGGAGTCATCAGAGTATAGAGTTTCATCCAATGTAAAGTCAGAACAAAACCAGGGAACCAAACAGAGGCATGATGATAGTAAGTTACCATCAAATCCTGAAGAAGTAGAAGACCTACGGCGTGACTCAGCTGCAAATCCTTTGATTGCATTCACTTATGATGAGTTAAAGATTATCACAGCAAATTTTAGGCAAGATCGTGTGTTGGGGGGAGGAGGATTTGGAAGGGTTTACAAAGGATTCATTTCTGAGGAGTTAAGGGAAGGGCTTCCAACACTTGCTGTAGCTGTTAAGGTTCATGATGGTGACAACAGTCATCAAGGGCACAGAGAATGGCTGGCAGAAGTCATATTTTTGGGGCAGCTTTCACATCCAAATCTAGTCAAGTTAATTGGATATTGCTGTGAAGACGAACATAGGGTGCTAATATACGAGTACATGTCCCGGGGAAGTGTGGAACACAACTTGTTCTCAAAAATTTTGCTTCCCTTGCCATGGTCCATAAGAATGAAGATTGCGTTTGGCGCTGCAAAGGGACTTGCATTTCTTCATGAAGCAGAGAAACCTGTCATCTATCGAGATTTCAAGACATCAAATATTTTATTGGACCAGGAGTACAATGCAAAACTTTCCGACTTTGGCCTTGCTAAGGATGGACCAGTTGGAGACAAATCCCATGTTTCTACTCGAGTAATGGGAACATATGGTTATGCCGCACCTGAATACATAATGACAGGTCATCTGACTCCTAGAAGTGATGTTTACAGCTTTGGTGTTGTTCTTCTTGAACTTCTCTCTGGAAGAAAATCTTTAGACAAGTTAAGACCTGCTAGAGAGCAGAACCTTGCAGAATGGGCTCTTCCTTTGCTGAAGGAAAAGAAGAAATTTCTAAACATCATAGATCCAAGGTTGGATGGTGATTATCCAATTAAAGCAGTTCACAAGGCTGCAATGCTTGCATATCATTGCTTGAACCGCAACCCGAAAGCAAGGCCTCTAATGCGAGATATTGTGGATTCATTGGAGCCTTTGCAGGCACACACAGAGGTCCCTATTGGAAAAACATTGACCATAATCAGTGAGGTTCCTGAATCTGGTTTGAAAATGAAAGATGATGCAATATGA 1146 0.4197 MGNCWCRWESSEYRVSSNVKSEQNQGTKQRHDDSKLPSNPEEVEDLRRDSAANPLIAFTYDELKIITANFRQDRVLGGGGFGRVYKGFISEELREGLPTLAVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVKLIGYCCEDEHRVLIYEYMSRGSVEHNLFSKILLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDQEYNAKLSDFGLAKDGPVGDKSHVSTRVMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLELLSGRKSLDKLRPAREQNLAEWALPLLKEKKKFLNIIDPRLDGDYPIKAVHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQAHTEVPIGKTLTIISEVPESGLKMKDDAI* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1040 381 Gene3D Transferase(Phosphotransferase) domain 1 154 363 - -
Gso8g1040 381 Gene3D Phosphorylase Kinase; domain 1 32 153 - -
Gso8g1040 381 SUPERFAMILY Protein kinase-like (PK-like) 46 348 IPR011009 -
Gso8g1040 381 ProSiteProfiles Protein kinase domain profile. 70 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1040 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Gso8g1040 381 PANTHER OS01G0588500 PROTEIN-RELATED 10 361 - -
Gso8g1040 381 CDD STKc_IRAK 76 351 - -
Gso8g1040 381 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL16-RELATED 10 361 - -
Gso8g1040 381 Pfam Protein tyrosine and serine/threonine kinase 72 348 IPR001245 GO:0004672|GO:0006468
Gso8g1040 381 MobiDBLite consensus disorder prediction 15 46 - -
Gso8g1040 381 ProSitePatterns Protein kinases ATP-binding region signature. 76 105 IPR017441 GO:0005524
Gso8g1040 381 MobiDBLite consensus disorder prediction 25 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1040 Gso-Chr8 9596957 9603715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1040 3 348 Glycoside Hydrolase AT3G07070 48.034 1.13e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso8g1040 PK_Tyr_Ser-Thr 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1040 - - gmx:100775722 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1420 5 37642314 37649878 Gso8g1040 8 9596957 9603715 GST