Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1038 ATGGCACTTTGTATGCAGAGAGATTCAGCATCAAACAAGCAACAGCTCATGGATTGTGGCAAGTATGTGAGGTACACACCTGAACAGGTGGAGGCTTTGGAGAGGGTTTATATTGAATGTCCAAAGCCTAGTTCTTCCAGAAGGCAACAAATCATTAGGGAGTGTCCACTCCTTGCTAACATTGAAACAAAGCAGATCAAAGTGTGGTTCCAGAATCGCAGATGTCGTGAAAAGCAGCGGAAGGAAGCCTCTCGTCTGCAGACAGTGAATAGAAAGCTGTCTGCAATGAACAAGTTGTTGATGGAAGAGAACGACCGACTGCAGAAGCAGGTCTCACAGTTGGTTTATGATAATGGATTCATGAAACAACAAATACATACTGCATCTGCTACTACTACTACTGACAATAGCTGTGAATCTGTGGTAGTGAGTGGTCAACGCCAACATCAAAACCCCAAAATTCAGCATCCCCAGTGGGATGCCAACAACCCAGCTGGTCTTCTTGCAATTGCTCAGGAGACCCTGGCGGCGTTCCTTTCAAAAGCTACTGGAACTGCTGTCAACTGGGTCCAAATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTTGCTGTTTCCCGCAACTGTAGTGGTGTAGCGGCAAGAGCCTGTGGCCTTGTGAGCCTTGAGCCCACAAAGGTTGCTGAGATTCTCAAAGATCGTCCATCATGGTATCGTGACTGTCGATGCCTCAATGTACTGAGTGTAATCCCCACAGGGAATGGGGGCACGATAGAGCTCATGTACATGCAGACATATGCACCAACAACATTGGCAGCTGCAAGAGACTTCTGGACTCTGAGATACACTACTAGTTTGGAAGATGGAAGTCTTGTGATTTGTGAAAGGTCCTTGACTTCTTCAACTGGTGGCCCCACAGGGCCTGCTGCTTCAAACTTCGTGAGAGCTGAAATGCTTCCTAGTGGCTATCTAATTAGATCCTGTGAGGGTGGTGGATCTATTGTTCACATTGTTGATCATGTTGATTTAGATGTTTGGAGTGTTCCTGAAGTACTTAGACCCCTCTATGAATCACCAAAATTCTTGGCTCAGAAATTGACTACTGCTGCCTTGCGAAATGTAAGACAAATTGCACAAGAATCAAGTGGAGAAGTTCAGTATGGTGGGGGTCGTCAGCCTGCTGTCTTGAGGACATTTAGTCAAAGGCTTTGCAAAGGGTTCAATGATGCTGTCAACGGGTTTGTGGATGATGGTTGGTCATTGATGGGTAATGATGGGGTTGAAGATGTGACCATAGGCATAAACTCATCTCCCAACAAGTTTTTCAGTTCCCATTACAATACATCAATGCTTCCCGCATTTGGAGGTGGGGTCTTGTGTGCGAAAGCATCAATGCTGCTACAGAATGTTCCTCCTGCTTTGCTTGTTCGTTTTCTGAGGGAGCATCGTTCAGAGTGGGCTAATTATGGGGTTGATGCATACTCTTCTGCATGTCTCAAAGCTAGTCCTTATGCAGTTCCTTGTGCAAGACCTAGTGGTTTCCCGAGCAGCCATGTCATTATACCACTTGCTCATACTATTGAGCATGAGGAGTTCTTGGAGGTAGTTCGTATTGAGGGTAATGCATTTCCCCCTGATGATGTAGCTTTGGCATGTGATATGTATTTAATGCAGCTGTGCAGTGGAATTGATGAAAATGCAATCGGAGCATGTGCACAGCTTGTGTTTGCACCTATCGATGAATCATTTGCAGATGATGCTCTCTTACTGCCTTCTGGTTTCCGCATCATACCATTGGATCCTAAAACAGATGGTCCGGCTTCAACTAGGACATTGGACTTAGCGTCAACACTGGAAACTGGATCTGGTAATGCTCGCTCAGCTGGTGAAAGTGACCTGAATAACTACAACCTTAGGTCGGTCCTCACAATTGCATTCCAATTTACCTTTGAGAACCATTTGCGGGACAATGTGGCTGTTATGGCTCGCCAGTATGTGCGTAATGTTGTGCGATCTGTTCAGAGGGTTGCTATGGCAATTGCTCCCTCTAGGATCAGTACACAGTTGGGGCCAAAGTCACTTCCTGGTCCACCAGAGGCCCTTACCTTAGCAAGATGGATCTGCAAAAGCTACAGTCTCCACACCTGCACAGAGCTTTTTAGCGTTGAGTCCACATCTGGTGATGCAATCTTGAAGCAACTTTGGCACCATCCAGATGCAATATTGTGCTGTTCTGTAAAAACAAATGCATCTCCAGTGTTCACCTTTGCAAACCAAGCTGGACTTGACATGCTTGAAACCACTCTTGTTGCTCTTCAAGACATAATGCTGGATAAAGTTCTTGATGAAGCTGGCAGGAAGTTTCTCTGCATTGAGTTCTCCAAGATAATGCAACAGGGATTTGCATATCTGCCAGCAGGAATATGTGTATCAAGTATGAATCGACCAGTGTCTTATGAGCAGGCCATTGCTTGGAAAGTTCTCGATGATGATGATTCCAACCACTGCCTTGCCTTTGTGTTCATGAACTGGTCTTTTGTCTGA 2550 0.4569 MALCMQRDSASNKQQLMDCGKYVRYTPEQVEALERVYIECPKPSSSRRQQIIRECPLLANIETKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVYDNGFMKQQIHTASATTTTDNSCESVVVSGQRQHQNPKIQHPQWDANNPAGLLAIAQETLAAFLSKATGTAVNWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCLNVLSVIPTGNGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPAASNFVRAEMLPSGYLIRSCEGGGSIVHIVDHVDLDVWSVPEVLRPLYESPKFLAQKLTTAALRNVRQIAQESSGEVQYGGGRQPAVLRTFSQRLCKGFNDAVNGFVDDGWSLMGNDGVEDVTIGINSSPNKFFSSHYNTSMLPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWANYGVDAYSSACLKASPYAVPCARPSGFPSSHVIIPLAHTIEHEEFLEVVRIEGNAFPPDDVALACDMYLMQLCSGIDENAIGACAQLVFAPIDESFADDALLLPSGFRIIPLDPKTDGPASTRTLDLASTLETGSGNARSAGESDLNNYNLRSVLTIAFQFTFENHLRDNVAVMARQYVRNVVRSVQRVAMAIAPSRISTQLGPKSLPGPPEALTLARWICKSYSLHTCTELFSVESTSGDAILKQLWHHPDAILCCSVKTNASPVFTFANQAGLDMLETTLVALQDIMLDKVLDEAGRKFLCIEFSKIMQQGFAYLPAGICVSSMNRPVSYEQAIAWKVLDDDDSNHCLAFVFMNWSFV* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1038 849 SMART HOX_1 18 84 IPR001356 GO:0003677
Gso8g1038 849 Pfam START domain 170 378 IPR002913 GO:0008289
Gso8g1038 849 SUPERFAMILY Bet v1-like 170 381 - -
Gso8g1038 849 ProSiteProfiles 'Homeobox' domain profile. 24 80 IPR001356 GO:0003677
Gso8g1038 849 Coils Coil 86 110 - -
Gso8g1038 849 Gene3D - 203 386 IPR023393 -
Gso8g1038 849 SMART START_1 169 379 IPR002913 GO:0008289
Gso8g1038 849 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 2 849 - -
Gso8g1038 849 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 2 849 IPR044830 GO:0003700
Gso8g1038 849 SUPERFAMILY Homeodomain-like 21 83 IPR009057 -
Gso8g1038 849 CDD bZIP 73 112 - -
Gso8g1038 849 CDD START_ArGLABRA2_like 164 380 - -
Gso8g1038 849 CDD homeodomain 21 81 IPR001356 GO:0003677
Gso8g1038 849 Gene3D - 11 87 - -
Gso8g1038 849 Pfam MEKHLA domain 704 848 IPR013978 -
Gso8g1038 849 ProSiteProfiles START domain profile. 160 360 IPR002913 GO:0008289
Gso8g1038 849 Pfam Homeodomain 22 79 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1038 Gso-Chr8 9570777 9576706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1038 1 849 Homeobox Transcription Factor Family AT2G34710 76.491 0.0 1341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gso8g1038 START 5.6e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1038 K09338 - gmx:100807637 1704.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1417 5 37612927 37619613 Gso8g1038 8 9570777 9576706 GST