Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1006 ATGCCAGGGAACAATTTTAACTGCGTCCCTTTAACACCAAGGTCTAGATTGGAAAGGCTTCTGAGGGAAAGAGAGCTAAGGAAATCCTTCAAGCTTGTTCAACCGACCGAGGAAGCAAGAGATGGCAGCAAAGAGGGAGAACAATTTTATGGTGATTCATACATAAGTGAGAATGAAATTTCAGGTAATCATAAAGAGGAAGAGGTCACGGAAACGAATGCGGATGCAAGAGGTTTTACAGGCAAACAACGCTTGTTGGTGGTAGCTAACAGGTTGCCTGTGTCTGCTGTTAGGGAGGGTGTGGAGTCATATCGCCTTGATATCAGTGTAGGCGGGCTAGTCAGTGCACTTCTAGGTGTAAAGGAATTTGATACCAGATGGATTGGGTGGGCTGGTGTGAATGTGCCTGATGATGTTGGGCAGAGAGCATTGACAAAAGCTTTAGCTGAAATGCGATGCATACCAGTATTTCTTGATGAGGAGATAGTTAATCAATACTATAATGGCTACTGCAACAACATCTTATGGCCTCTATTTCATTACCTTGGGCTTCCACAAGAAGATAGACTTGCTACAACTCGTACTTTCCAATCCCAATTTGATGCATATAAGAAGGCAAACCAAATGTTTGCTGATGTAGTAAATAAGCATTATGAGGAAGGAGATGTTGTTTGGTGCCATGATTACCACCTAATGTTCCTTCCAAAATGTTTAAAACAATACAATGACAAAATGAAAGTTGGTTGGTTTCTCCATACACCCTTTCCTTCCTCAGAAATACATAGGACTCTACCGTCCAGATCAGAGCTGTTGAGATCTGTACTTGCAGCTGACCTGGTGGGATTCCATACCTATGATTATGCCAGGCATTTTGTTAGCGCTTGTACTCGTATTCTTGGGCTTGAGGGAACACCTGAAGGAGTAGAAGATCATGGGAAACTGACCCGTGTGGCTGCGTTTCCTATTGGGATTGACTCTGATAGATTCACTCAAGCCCTTGAACTCCCTGAAGTCCAGGAACACATGAAAGAACTAAAAGAAAGATTTGCAGGCCGAAAGGTAATGTTGGGTGTCGATCGTCTTGATATGATAAAAGGAATTCCCCAAAAAATCTTGGCATTTGAAAAGTTCCTTGAGGAGAATTCACACTGGCGTGATAAAGTTGTCTTGCTACAAATTGCTGTACCTACTAGGAAAGATGTTCCGGAATATCAAAAGCTTACAAGCCAAGTGCATGAGATTGTAGGACGCATCAATGGAAGATTTGGTACACTTACAGCTGTTCCAATACACCATCTGGATCGGTCACTTGACTTTCATGAATTATGTGCACTCTATGCTGTAACTGATGTAGCACTTGTTACATCTTTAAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTTGCGTGCCAAGCATCCAAGAAAGGGGTTCTCATTTTAAGTGAGTTTGCAGGAGCAGCACAGTCTCTTGGTGCTGGTGCTATCTTGGTAAACCCATGGAACATCACAGAGATAGCTGCTTCTATTGGTTATGCGTTGGAAATGTCAGCTGATGAAAGAGAAAAACGACATCAGTTTAATTTCAAACATGTGAAGACTCACACGTCACAGGAATGGGCTGCAACTTTTGTGAGTGAACTTAATGATACCATTGTTGAAGCTCAGCTTAGGACAAGACAAGTTCCTCCATTACTTCCCAACAAAGTGGCAGTTGATTGTTACTCAAAATCCAATAACCGATTAATCATACTGGGTTTCAATGCCACTTTGAATGAACCAGTGGATGCCCTTGGAAGGGCTGGTCAAATTAGAGAATTGGAACATAAATTACACTCAAATACGAAGGAACCTTTAAAGAAGTTATCCGATGATCCAAAAACAACAATAGTAGTTCTGAGTGGGAGCGGCCGAGCTGTCCTGGACAAAAACTTCAGTGAATTTAACATGTGGTTGGCAGCAGAAAATGGGATCTTTTTGCGACATACTTCAAGTGAGTGGATGACAACCATGCCTGAAAATTTAAACATGGATTGGGTTGATAGCGTGAAGCATGTTTTTGAGTATTTTACTGAAAGAACTCCAAGGTCTCATTTTGAGCTTCGGGAGATGTCAATAGTATGGAATTACAAGTATGCAGATGTTGAGTTTGGAAGGATTCAAGCAAGAGATCTGCTTCAACATCTGTGGGCAGGGCCAATATCAAATGCATCTCTTGATGTTGTCCAAGGTGGTCGATCTGTTGAGGTCCGCACAATTGGCGTGTCAAAGGGAGCAGCTATTGATCGTATCCTTGGAGAGATAGTTCATAAAAAAGGCATGAAGACACCAATTGACTATGTCCTATGCGTTGGCCACTTTCTAGCCAAGGATGAAGATGTGTATCAATTTTTTGAGCCAGAGCTACCATCTGAATCACCTCCAGTACCAAGAGCTATGCTATCCAAATCCAATTCTTACAGGCCATCATCTCTGTCAAAATTACCAGCCACCACCAAAACCAGTTCGAAGGCAGCTCAATACAAGAAACAACGTTCGTTGTCAAACATAGAAAAGAGAGAACTTGATCAATGGAGACCAATGTGTGGTGATAAAATAGCACTGCATGAGGGTTCCTCAGTGCTTGATTTAAAAGGTGATAATTACTTCTCTTGTGTTGTTGGACGGAAAAGATCAAGTGCACGTTACCTTCTTAAAACCTCAGATGATGTTGTCAACCTCTTACGTGACTTGGCAGAACATTCTTCTTCACCAACTTAA 2760 0.4188 MPGNNFNCVPLTPRSRLERLLRERELRKSFKLVQPTEEARDGSKEGEQFYGDSYISENEISGNHKEEEVTETNADARGFTGKQRLLVVANRLPVSAVREGVESYRLDISVGGLVSALLGVKEFDTRWIGWAGVNVPDDVGQRALTKALAEMRCIPVFLDEEIVNQYYNGYCNNILWPLFHYLGLPQEDRLATTRTFQSQFDAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKQYNDKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDHGKLTRVAAFPIGIDSDRFTQALELPEVQEHMKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENSHWRDKVVLLQIAVPTRKDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHELCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEIAASIGYALEMSADEREKRHQFNFKHVKTHTSQEWAATFVSELNDTIVEAQLRTRQVPPLLPNKVAVDCYSKSNNRLIILGFNATLNEPVDALGRAGQIRELEHKLHSNTKEPLKKLSDDPKTTIVVLSGSGRAVLDKNFSEFNMWLAAENGIFLRHTSSEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFELREMSIVWNYKYADVEFGRIQARDLLQHLWAGPISNASLDVVQGGRSVEVRTIGVSKGAAIDRILGEIVHKKGMKTPIDYVLCVGHFLAKDEDVYQFFEPELPSESPPVPRAMLSKSNSYRPSSLSKLPATTKTSSKAAQYKKQRSLSNIEKRELDQWRPMCGDKIALHEGSSVLDLKGDNYFSCVVGRKRSSARYLLKTSDDVVNLLRDLAEHSSSPT* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1006 919 Pfam Glycosyltransferase family 20 84 549 IPR001830 GO:0003824|GO:0005992
Gso8g1006 919 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 78 911 - -
Gso8g1006 919 Gene3D Glycogen Phosphorylase B; 331 534 - -
Gso8g1006 919 Gene3D Glycogen Phosphorylase B; 77 330 - -
Gso8g1006 919 CDD GT20_TPS 84 549 IPR001830 GO:0003824|GO:0005992
Gso8g1006 919 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 83 552 - -
Gso8g1006 919 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 78 911 IPR001830 GO:0003824|GO:0005992
Gso8g1006 919 Pfam Trehalose-phosphatase 607 807 IPR003337 GO:0003824|GO:0005992
Gso8g1006 919 MobiDBLite consensus disorder prediction 811 840 - -
Gso8g1006 919 SUPERFAMILY HAD-like 608 910 IPR036412 -
Gso8g1006 919 MobiDBLite consensus disorder prediction 802 840 - -
Gso8g1006 919 Gene3D - 609 767 IPR023214 -
Gso8g1006 919 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 84 549 IPR012766 GO:0003825|GO:0005992
Gso8g1006 919 Gene3D - 673 753 - -
Gso8g1006 919 CDD HAD_TPP 582 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1006 Gso-Chr8 9352914 9361058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1006 1 918 Trehalose Biosynthesis Gene Families AT1G78580 73.474 0.0 1385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1006 K16055 - gmx:100797533 1823.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1391 5 37389334 37398343 Gso8g1006 8 9352914 9361058 GST