Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0987 ATGGATAGTAAGTTCAGAAAAAACAACCGCAACTCATATACCAGTGAACAAGATCAAGACACTGATCATGATGTAGCTCAAGAAAACATTGCCGAGTCCCCTCCTTCTTCCACTGTGTTCAACATCGATGGCTTAGTCCCATCCCCCACTCCTTCATCAAAGAGAAGCAGGAGGGCAATACAGAAAAGGGTGGTGCAAATCCCAATGAAGGAGACAGAAGGATGTAGGCTAAAAGGAGAGAGCAACACCCCACCCTCGGATTCATGGGCTTGGAGAAAGTATGGACAGAAACCCATCAAGGGTTCCCCTTATCCCAGAGGGTACTACAGGTGTAGCAGTTCCAAGGGCTGTCCGGCACGGAAACAAGTGGAAAGGAGCTGCGTGGACCCCACAATGCTAGTCGTCACTTACTCCTCCGACCACAACCATCCATGGCCACCTTCTAGAAACCACGCCAGGCCCACCAAGAAGCCTGAACCGGTTCCGGACCCGGTCCAACCCGAACCGGAGGAGAAGTTCGCGGACCTGGGCGGGGACGACTCCATGATAACCACCGCGGAGGAATTGGGCTGGCTGGGGGAGATGGAAACGACGTCATCCACGGTGCTCGAAAGCCCCATTATGGCCACGGGCTACCACGCTGACGTGGCGCTGATTCCGATGAGGGAGGAGGACGAGTCGCTCTTCGCCGACCTCGGGGAGCTGCCGGAGTGCTCGGTGGTATTCAGGCAGGGGCTGCTGACGGAGCGGCGGCGGTACACCGCGCCGTGGTGCGGGACCACAAGTTGA 789 0.564 MDSKFRKNNRNSYTSEQDQDTDHDVAQENIAESPPSSTVFNIDGLVPSPTPSSKRSRRAIQKRVVQIPMKETEGCRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSCVDPTMLVVTYSSDHNHPWPPSRNHARPTKKPEPVPDPVQPEPEEKFADLGGDDSMITTAEELGWLGEMETTSSTVLESPIMATGYHADVALIPMREEDESLFADLGELPECSVVFRQGLLTERRRYTAPWCGTTS* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0987 262 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 246 IPR044810 GO:0003700
Gso8g0987 262 Pfam WRKY DNA -binding domain 87 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g0987 262 ProSiteProfiles WRKY domain profile. 86 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g0987 262 MobiDBLite consensus disorder prediction 139 178 - -
Gso8g0987 262 MobiDBLite consensus disorder prediction 152 177 - -
Gso8g0987 262 MobiDBLite consensus disorder prediction 1 96 - -
Gso8g0987 262 MobiDBLite consensus disorder prediction 1 27 - -
Gso8g0987 262 Gene3D WRKY domain 74 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g0987 262 SUPERFAMILY WRKY DNA-binding domain 83 146 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g0987 262 SMART WRKY_cls 85 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g0987 262 PANTHER WRKY TRANSCRIPTION FACTOR 65-RELATED 1 246 - -
Gso8g0987 262 MobiDBLite consensus disorder prediction 30 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0987 Gso-Chr8 9150196 9152173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0987 22 244 WRKY Transcription Factor Family AT1G29280 59.664 1.89e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso8g0987 WRKY 5.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0987 - - gmx:100127392 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1365 5 37163858 37165641 Gso8g0987 8 9150196 9152173 GST