Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0984 ATGAAGAATTGCGATGAATGGAAACCTTTCCTAGTAATGATAGCAATAGATTTTTCTTTAACCATGGTGAACATTCTTCTCAAGAAAGTCCTTCAAGAAGGAATGAACCATTTGGTTTTTATCACATATCGTCTCTCAGTTGCTACTATATTTCTGGCCCCCATCGGCTACTTTAAGGAAAGAAATGGAAGACCACATCTCACATTTCAAATTTTATGCTGCCTTTTCTTCAGTGCCATTATTGGGGCATCCGTCACACAATACTTCTTCCTTCTGGGGATCCAATACACCTCAGCCACCTTTGCTTGTGCCTTTGTTAATATGGTCCCGGTGATCACATTCATTATGGCATTACCATTTGGATTAGAAACTGTGAACATTAAATGCAAAGGTGGGAAAGCGAAGATTCTTGGTACATTTGTGTGCATAGCAGGGGCATTGTTGTTGACACTTTACAAAGGAAAACCCTTGTTTGATGGGTCTCACTATCAATCTGCAATGGACCAAGCTTCTTCTACTACTAGATCAACACAGAAATGGACCATCGGTGTAATAGCTTTGATTATGGGAACCCTTTTTTGGTCTTTTTGGTTTATTTTACAGTCAAAGATAGGGAAGAGATATCCTTGCCAGTATTCAAGCACAGCCATCATGACCTTCTTTGGAGCCATGCAAGCAGCTATTCTTGGTTTCTCCACTGGCAGCAGCAACTTGTCCTCGTGGGTTCTCAAGGATAAGATACAAATAATCACCGTTCTTTATTCTGGGATAGTTGGGTCAAGTGTGTGCTATGTGGGCATGTCATGGTGCGTAAAGAAGAGGGGTCCGGTCTTTACTGCTGCATTCAGCCCTCTTGTTCAGATAATGTCGGGCATGATTGATATCCCCTTCTTGCACGAGCAGCTTCATCTTGGAAGTGTGGTGGGATCCATGTTGGTGATGATCGGGTTGTACATTCTTCTGTGGGGCAAAAGCAAGGATATGATGCAGAATAATGGCGCCACTAAGTTCGCCCAAGAAGTTGAAGAAACCAAGGAACAGGAGCCGCAAGTATAA 1056 0.4252 MKNCDEWKPFLVMIAIDFSLTMVNILLKKVLQEGMNHLVFITYRLSVATIFLAPIGYFKERNGRPHLTFQILCCLFFSAIIGASVTQYFFLLGIQYTSATFACAFVNMVPVITFIMALPFGLETVNIKCKGGKAKILGTFVCIAGALLLTLYKGKPLFDGSHYQSAMDQASSTTRSTQKWTIGVIALIMGTLFWSFWFILQSKIGKRYPCQYSSTAIMTFFGAMQAAILGFSTGSSNLSSWVLKDKIQIITVLYSGIVGSSVCYVGMSWCVKKRGPVFTAAFSPLVQIMSGMIDIPFLHEQLHLGSVVGSMLVMIGLYILLWGKSKDMMQNNGATKFAQEVEETKEQEPQV* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0984 351 Pfam EamA-like transporter family 182 321 IPR000620 GO:0016020|GO:0016021
Gso8g0984 351 Pfam EamA-like transporter family 24 150 IPR000620 GO:0016020|GO:0016021
Gso8g0984 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Gso8g0984 351 PANTHER WAT1-RELATED PROTEIN 9 347 - -
Gso8g0984 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 325 - -
Gso8g0984 351 PANTHER WAT1-RELATED PROTEIN 9 347 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0984 Gso-Chr8 9093236 9095965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0984 5 328 Nodulin-like Gene Family AT1G11460 38.462 1.19e-88 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0984 - - gmx:100813873 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1361 5 37095168 37097851 Gso8g0984 8 9093236 9095965 GST
Gso8g0984 8 9093236 9095965 Gso15g0726 15 6537146 6539924 PCT
Gso8g0984 8 9093236 9095965 Gso11g2550 11 41541867 41544947 PCT
Gso15g0726 15 6537146 6539924 Gso8g0984 8 9093236 9095965 PCT
Gso11g2550 11 41541867 41544947 Gso8g0984 8 9093236 9095965 PCT