Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0975 ATGTCAGAAGAATATGAGAGGAGTGAGGAACATGCTGATGATGACTCTTCAATGGGATCATCCCAGAAATGCTCATCCTTTGATTTGAATGAAGAAGCTAGTAGTGAAGATAACAATGACAACGATGAGGGGTATGATGAGGAAGCAAAAGACGAAGGTACTTCAACTAATAAAAGTAGCAGCATAACGAAGGAAGGAAGTAATGAACGAAGAGGTGGCGTGAGACAATATGTTAGATCAAAGATGCCTCGGCTCCGGTGGACACCTGAACTTCATCTATCCTTTGTACATGCTGTTGAAAGGCTTGGTGGTCAAGAAAGAGCAACACCCAAATTGGTGCTTCAGCTAATGAATGTGAGAGGCCTCAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAACTCGACGAGGCTGGGCAAGTATTAGGTCAAACATATAAATCAACCCATGAACTTGGTCGTATTTTTCATGTAGCCCATCAGTCCATGAATCCTCGTCAACATTTTAAGATGGGAAATGGTGGAATTATTCTAGCAAGTGATTACAACGATCGCAGTTATTTCCATGGTCTCATGCATCCCTCCTCCCTATCACCTTCACAATCAAAAGCCATCGATTCAAGGCACCAACAATGGTACTTCAATAGTCATCAACCTTATAGAAGACCAAGTTACTTTAGCAACGAAGTTGTCTCCTCAACAACCTTACAAACGCAAGGAAGATCAATGTCTTCAAACCAAATTAACCTAATGGATGCTACCAGCATTGCACCCATGAAACCAAGCCAGTTTCTTGAAGAGAAAAAGTGGCCTCCCTTAGATATTATGAACAACCATCACTGGAAGAAAAGGCTACCTGCCAATATTAGTTCAAATAGTGGGTCGCAACCTGTTGTACATCAATTTGGCACCACTTCACCATCTCTAAGACCTAGCGAGTTGAACTTCGGAAACAACACAAGAATCAGCTGGGAACATCTATCAAACTCCGACGAGCATCGTAACTATTCCAACAGTTTAAAGCTAGAATTGGAGCCTCTTTTTCGGATTAAGTCGAATCAAGAAAAATTGCAGAAAGAGAAGCAATGGGCGCCTGATTTGCGACTGAGTTTAAGTCAGAGAGACGGCAACAATGATGGCAAGACTGATCATTGCAGAGAAACCCAAGAAATCAACACGAAACTTTCACTTTCATAG 1209 0.4194 MSEEYERSEEHADDDSSMGSSQKCSSFDLNEEASSEDNNDNDEGYDEEAKDEGTSTNKSSSITKEGSNERRGGVRQYVRSKMPRLRWTPELHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVLGQTYKSTHELGRIFHVAHQSMNPRQHFKMGNGGIILASDYNDRSYFHGLMHPSSLSPSQSKAIDSRHQQWYFNSHQPYRRPSYFSNEVVSSTTLQTQGRSMSSNQINLMDATSIAPMKPSQFLEEKKWPPLDIMNNHHWKKRLPANISSNSGSQPVVHQFGTTSPSLRPSELNFGNNTRISWEHLSNSDEHRNYSNSLKLELEPLFRIKSNQEKLQKEKQWAPDLRLSLSQRDGNNDGKTDHCRETQEINTKLSLS* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0975 402 Gene3D - 82 139 - -
Gso8g0975 402 Pfam Myb-like DNA-binding domain 85 135 IPR001005 -
Gso8g0975 402 SUPERFAMILY Homeodomain-like 81 137 IPR009057 -
Gso8g0975 402 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 83 138 IPR006447 GO:0003677
Gso8g0975 402 MobiDBLite consensus disorder prediction 33 49 - -
Gso8g0975 402 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 139 IPR017930 -
Gso8g0975 402 MobiDBLite consensus disorder prediction 1 17 - -
Gso8g0975 402 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 402 IPR044848 GO:0003700
Gso8g0975 402 MobiDBLite consensus disorder prediction 18 32 - -
Gso8g0975 402 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 402 - -
Gso8g0975 402 MobiDBLite consensus disorder prediction 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0975 Gso-Chr8 9010291 9016225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0975 20 140 G2-like Transcription Factor Family AT2G42660 56.557 4.45e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso8g0975 Myb_DNA-binding 2.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0975 - - gmx:100787138 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1353 5 37023300 37029554 Gso8g0975 8 9010291 9016225 GST
Gso8g0975 8 9010291 9016225 Gso15g0712 15 6388131 6392829 PCT
Gso8g0975 8 9010291 9016225 Gso11g2565 11 41714250 41719151 PCT
Gso15g0712 15 6388131 6392829 Gso8g0975 8 9010291 9016225 PCT
Gso11g2565 11 41714250 41719151 Gso8g0975 8 9010291 9016225 PCT