Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0974 ATGGAAAGCATATGGGGGCCATTTGGATTATGGCTCCGAATTTATGTTGGATTGATTTCTCTGTGGGGAACTCAACAGTGTTCGTCTCTGAACGATGAAGGATTAACCTTGTTGGAATTTCGGGGAAGAATAACTTCTGATCCTTTTGCTGCTCTGGCAAATTGGAATCCAAATGATTGCAACCCTTGCAAATGGCTGGGTGTCCGTTGTGTTGATGGTCAAGTGCAATCACTGGTCCTACCTGATCTATCTTTGGAAGGGACATTGGCTCCTGAGCTTGGGAAACTTAGTCATCTAAAATCCCTTGTACTATACAAGAACAGTTTTTCTGGTACCATTCCCAAAGAACTTGGAGATCTAGACAAGCTGGAGTTATTGGATTTAAGGGGGAATGACTTGACTGGATGTATCCCAGCAGAAATTGCCAGGGTGTTGTTGTCAAAAAACCTGTTGGTTTGTGACAATAAATTTGAAGGCAGTGATTCTCAAGAGCTCAGAAAGCTAAGGTTGCCCTCTAATAACAATAACAGAAAGTTTGTGCACCAGTTCAAGCTAGGAAAGGCTACTCCTCATGCCTATGAAGAGAAATATTGTGATAATCTGACTAGTTCTGATGAGTCAGAGTTTGTCCAGAATGTAGTTGATTCAGCACGACGTAAGTTGCTTGATCAGTCCAGTAACCTTGCAGCTGAACATTTCAGTGGTGGGCCTGCTATAGAGATCAGTTCTATTCCAATTACCCAGAGCAGTGGAGCTTTCCCAGCTGTGCCAGACACCAATAAGAAACAAAATCAGTCACCTGCACCATTGCCTTCACCTTCTGTTTCTCCACATGTGAATCAAGCAAGTCAACAAAATTCACCTAATGGTGCATCTGGAAAATTATGGAAGTATATCATTATAATCACAGGTGTTGCTGTCTTGGTCATTCTTGTTGTGATCATGCTTTGCATTTGGCGAAAACGAGCAGCAAAAGTAATAAAGCCCTGGAAGACAGGAATAAGTGGACAGTTGCAGAAAGCATTTATAACAGGGGTCCCCAAGTTGAATCGGGGAGAGCTGGAAACAGCCTGTGAAGATTTCAGCAATATTATTAATAGTTTTGATGAATGCACCGTATACAAAGGAACACTATCCAGTGGAGTCGAGATTGCTGTCGATTCAACTATTGTTGCTTCTGCCAATGATTGGTCAAAGAACATGGAGACAGCCTATCGCAAAAAGATTGCTGCATTGTCCCGTGTTAACCATAAGAACTTTACCAATCTTATTGGGTATTGTGACGAAGAAGAACCATTCACAAGGATGATGGTGTTTGAGTATGCTCCAAATGGAAACTTATTTGAGCATCTGCATGTTAAGGAAGTTGAGCCTCTTGACTGGAGCACAAGGATGAGGGTTATTATGGGCACGGCTTATTGTCTTCAGTATATGCACCATGATCTAAATCCACCTGTAGCTCATTCCAACCTCAATTCAATTGCTATATTATTAACAGATGACTTTGCTGCTAAGATATCAGAGATCTCTTTCGGCAAGCATGCAAAAACCAACACAACTGGAGATGAATCACATAAATCTTCTGAGTTGCCACCCCAGGCTGATCCCGAAACCGATGTCTATAACTTTGGAGTATTGTTGCTTGAAATCATTTCTGGGAAACTACCTTACTCTGAAGAACAAGGCCACCTTGCCAACTGGGCTGCTGAGCACTTGAACGATAAGCAAAGCATCAGCTATCTGATCGATCCCACGCTGCAGTCCTTCAAAGACGAAGAACTTGATGTCATCTGTGAGGTGATCAAAGATTGTCTTCAATCTGATCCAAGGTTAAGATCTACAATGAAGGAAATAACTCCCAGATTACGGGAAGTGCTTCATATATCACCCGAGCAAGCTGTCCCAAGACTCTCTCCACTCTGGTGGGCTGAACTGGAGATCTTATCAGTGGAGGCCACTTAA 1962 0.4251 MESIWGPFGLWLRIYVGLISLWGTQQCSSLNDEGLTLLEFRGRITSDPFAALANWNPNDCNPCKWLGVRCVDGQVQSLVLPDLSLEGTLAPELGKLSHLKSLVLYKNSFSGTIPKELGDLDKLELLDLRGNDLTGCIPAEIARVLLSKNLLVCDNKFEGSDSQELRKLRLPSNNNNRKFVHQFKLGKATPHAYEEKYCDNLTSSDESEFVQNVVDSARRKLLDQSSNLAAEHFSGGPAIEISSIPITQSSGAFPAVPDTNKKQNQSPAPLPSPSVSPHVNQASQQNSPNGASGKLWKYIIIITGVAVLVILVVIMLCIWRKRAAKVIKPWKTGISGQLQKAFITGVPKLNRGELETACEDFSNIINSFDECTVYKGTLSSGVEIAVDSTIVASANDWSKNMETAYRKKIAALSRVNHKNFTNLIGYCDEEEPFTRMMVFEYAPNGNLFEHLHVKEVEPLDWSTRMRVIMGTAYCLQYMHHDLNPPVAHSNLNSIAILLTDDFAAKISEISFGKHAKTNTTGDESHKSSELPPQADPETDVYNFGVLLLEIISGKLPYSEEQGHLANWAAEHLNDKQSISYLIDPTLQSFKDEELDVICEVIKDCLQSDPRLRSTMKEITPRLREVLHISPEQAVPRLSPLWWAELEILSVEAT* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0974 653 PANTHER LRR RECEPTOR-LIKE KINASE 1 653 - -
Gso8g0974 653 Pfam Protein tyrosine and serine/threonine kinase 372 621 IPR001245 GO:0004672|GO:0006468
Gso8g0974 653 SUPERFAMILY Protein kinase-like (PK-like) 349 621 IPR011009 -
Gso8g0974 653 Gene3D Transferase(Phosphotransferase) domain 1 442 634 - -
Gso8g0974 653 MobiDBLite consensus disorder prediction 252 289 - -
Gso8g0974 653 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Gso8g0974 653 MobiDBLite consensus disorder prediction 518 532 - -
Gso8g0974 653 Gene3D Ribonuclease Inhibitor 32 194 IPR032675 -
Gso8g0974 653 Gene3D Phosphorylase Kinase; domain 1 330 441 - -
Gso8g0974 653 PANTHER PROTEIN MALE DISCOVERER 2 1 653 - -
Gso8g0974 653 ProSiteProfiles Protein kinase domain profile. 343 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0974 653 MobiDBLite consensus disorder prediction 515 536 - -
Gso8g0974 653 SUPERFAMILY L domain-like 29 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0974 Gso-Chr8 8985742 8992237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0974 27 625 Receptor kinase-like Gene Family AT2G42290 26.555 6.08e-46 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gso8g0974 PK_Tyr_Ser-Thr 2.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0974 - - gmx:100786591 1288.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1352 5 36999811 37006703 Gso8g0974 8 8985742 8992237 GST