Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0973 ATGGCAGAGGTGGCGGCGCCGAAGAAGGAAAACCCGAATCTTCTCCTTGGGCGGTTCGAGCTCGGAAAGCTCCTCGGGCATGGAACCTTCGCGAAGGTCCACCACGCGCGCAACATCAAAACCGGAGAAGGAGTCGCCATCAAGATCATCAACAAGGAGAAAATCCTAAAGGGTGGTTTGGTCTCCCACATCAAGCGCGAGATCTCCATCCTCCGCCGCGTGCGCCACCCCAACATCGTGCAACTCTTCGAAGTCATGGCCACAAAGACCAAGATCTACTTCGTCATGGAATTCGTCCGTGGCGGCGAACTCTTCAACAAGGTCGCAAAGGGAAGGTTAAAAGAAGAAGTCGCCAGAAAGTACTTCCAACAGTTGGTTTCCGCGGTGGAGTTTTGCCACGCGCGCGGCGTGTTCCACAGGGATTTAAAGCCCGAGAATTTGTTGCTGGACGAGGATGGGAACCTTAAAGTCTCCGACTTTGGACTCAGTGCTGTGTCGGACCAGATAAGGCATGACGGGCTGTTCCACACGTTTTGCGGAACACCCGCGTATGTTGCTCCTGAGGTTTTGGCGCGGAAAGGGTACGATGGTGCAAAGGTTGATATTTGGTCTTGTGGGGTTGTTTTGTTTGTTTTGATGGCGGGTTATTTGCCCTTCCATGACCGTAACGTTATGGCTATGTATAAGAAGATTTACAAGGGTGAGTTTCGGTGTCCCAGGTGGTTTTCTTCTGAACTTACAAGACTTTTCTCTAGGCTTCTCGATACTAACCCTCAGACAAGGATTTCTATTCCCGAAATCATGGAGAATCGCTGGTTCAAGAAGGGTTTCAAGCAGATTAAGTTTTATGTGGAGGATGATAGAGTTTGTAGTTTTGATGAGAAACAGCTGCAGCATCATGATGGCGATGATTATTTGGCAACATCGGATTCTGAGGTTGAGATTAGAAGGAAGAATAGTAATTGCAATAGTACTAGTAATGGTAATTCGTTGCCGAGGCCTGCGAGTTTGAATGCGTTTGACATAATATCGTTTTCTCAAGGCTTTGATCTATCAGGGTTGTTTGAGGAGAAGGGTGATGAGGCGAGGTTTGTGTCTTCTGCTCCGGTGTCGAAGATTATATCGAAATTGGAGGAGGTTGCTCAGTTGGTTAGCTTCACTGTGAGGAAGAAAGATTGCAGGGTGAGCTTGGAGGGGTGTAGAGAAGGTGTGAAAGGGCCTTTGACTATTGCTGCTGAGATTTTTGAGTTGACACCTTCCTTGGTGGTGGTGGAGGTGAAGAAAAAAGGAGGGGATAAGGCAGAGTATGAGAAGTTTTGTAACTCTGAGCTGAAACCCGCGTTGGAGAATTTGGGGATGGAGGATTCTGCTTCTTCTTCTTCTTCTTGTCATCAATCTACACACACTCAATCTGAATTCCAACAACAACATCGAACATTTTCTGACTCTGCCCTTAACAGACATTCAGATAATAATGAATGCTTATATGAACAAGAGTTGGGTCTAGCAGAAGAGACTAGTATCCCACAACTTGGTGAACCAAAGTTCGAATTTCAACAGGAAAATGTGCCCATGTTTACTATTTGA 1587 0.4682 MAEVAAPKKENPNLLLGRFELGKLLGHGTFAKVHHARNIKTGEGVAIKIINKEKILKGGLVSHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEFVRGGELFNKVAKGRLKEEVARKYFQQLVSAVEFCHARGVFHRDLKPENLLLDEDGNLKVSDFGLSAVSDQIRHDGLFHTFCGTPAYVAPEVLARKGYDGAKVDIWSCGVVLFVLMAGYLPFHDRNVMAMYKKIYKGEFRCPRWFSSELTRLFSRLLDTNPQTRISIPEIMENRWFKKGFKQIKFYVEDDRVCSFDEKQLQHHDGDDYLATSDSEVEIRRKNSNCNSTSNGNSLPRPASLNAFDIISFSQGFDLSGLFEEKGDEARFVSSAPVSKIISKLEEVAQLVSFTVRKKDCRVSLEGCREGVKGPLTIAAEIFELTPSLVVVEVKKKGGDKAEYEKFCNSELKPALENLGMEDSASSSSSCHQSTHTQSEFQQQHRTFSDSALNRHSDNNECLYEQELGLAEETSIPQLGEPKFEFQQENVPMFTI* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0973 528 PANTHER - 13 462 - -
Gso8g0973 528 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Gso8g0973 528 CDD STKc_SnRK3 18 272 - -
Gso8g0973 528 SMART serkin_6 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0973 528 CDD CIPK_C 338 448 - -
Gso8g0973 528 ProSiteProfiles NAF domain profile. 332 356 IPR018451 GO:0007165
Gso8g0973 528 ProSiteProfiles Protein kinase domain profile. 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0973 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Gso8g0973 528 Gene3D Transferase(Phosphotransferase) domain 1 9 331 - -
Gso8g0973 528 SUPERFAMILY Protein kinase-like (PK-like) 15 274 IPR011009 -
Gso8g0973 528 Gene3D Kinase associated domain 1, KA1 334 452 - -
Gso8g0973 528 Pfam Protein kinase domain 20 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0973 528 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 13 462 - -
Gso8g0973 528 Pfam NAF domain 334 390 IPR004041 GO:0007165
Gso8g0973 528 MobiDBLite consensus disorder prediction 453 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0973 Gso-Chr8 8978683 8980734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0973 3 455 CBL-interacting serine-threonine protein kinases AT4G18700 78.166 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso8g0973 Pkinase 3.2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0973 - - gmx:100786078 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1351 5 36992389 36994386 Gso8g0973 8 8978683 8980734 GST