Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0963 ATGGCTTCTCCTGGTGGAAGTGGGACCTATTCATCTGGTTCAAGTTCTCTTCAAAACTCTGGTTCTGAGGGAGACAGAGACATCATGGAACAGAGGAAGAGGAAGAGAATGCTATCCAATAGGGAATCGGCACGTAGATCGAGGATGAGGAAACAGCAGCACCTGGAAGGTCTCAGTGCCCAATTGGATCAGCTAAAAAAGGAGAACACCCAAATGAACACAAACATAGGCATCAGCACGCAGCTGTACCTCAACGTGGAAGCTGAGAACGCGATTCTGAGGGCTCAAATGGAAGAACTGAGCAAGAGATTGAACTCTCTGAACGAAATGATAAGTTTGATTAACTCCACCACCACCACCAACAACTGCTTGATGTTCGATGAGGCACAGGAGACTACGACTCAGTTGTTCAATGATTGTGGCTTCATGGATGCTTGGAATTACGGAATACCACTCAATCAACAAATCATGGCTTACGCTGACAATGACATGTTGATGATGTATTGA 507 0.4556 MASPGGSGTYSSGSSSLQNSGSEGDRDIMEQRKRKRMLSNRESARRSRMRKQQHLEGLSAQLDQLKKENTQMNTNIGISTQLYLNVEAENAILRAQMEELSKRLNSLNEMISLINSTTTTNNCLMFDEAQETTTQLFNDCGFMDAWNYGIPLNQQIMAYADNDMLMMY* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0963 168 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 1 166 - -
Gso8g0963 168 Coils Coil 48 75 - -
Gso8g0963 168 Coils Coil 83 117 - -
Gso8g0963 168 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 35 50 IPR004827 GO:0003700|GO:0006355
Gso8g0963 168 CDD bZIP_plant_GBF1 33 83 IPR045314 GO:0003700|GO:0006355
Gso8g0963 168 Pfam bZIP transcription factor 31 78 IPR004827 GO:0003700|GO:0006355
Gso8g0963 168 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 166 - -
Gso8g0963 168 MobiDBLite consensus disorder prediction 1 24 - -
Gso8g0963 168 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 30 76 IPR004827 GO:0003700|GO:0006355
Gso8g0963 168 SUPERFAMILY Leucine zipper domain 32 84 IPR046347 GO:0003700|GO:0006355
Gso8g0963 168 Gene3D - 30 84 - -
Gso8g0963 168 MobiDBLite consensus disorder prediction 1 54 - -
Gso8g0963 168 SMART brlzneu 28 92 IPR004827 GO:0003700|GO:0006355
Gso8g0963 168 MobiDBLite consensus disorder prediction 25 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0963 Gso-Chr8 8859821 8861248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0963 28 161 bZIP Transcription Factor Family AT4G34590 51.493 4.68e-37 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso8g0963 bZIP_1 2.2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0963 K25786 - gmx:778139 298.901