Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0962 ATGGCAACTCTAGTTGAACCTCCCAACAGAATTAAGCCAAAGGGGAAGCATTATTATACAATATGGCAAACATTGTTTGAGATTGATACGAAGTATGTTCCAATTAAACCTATAGGCCGAGGAGCGTATGGCGTGGTGTGCTCTTCGATCAACAGGGAGACCAATGAGAAAGTTGCAATTAAGAAGATTGGTAATATATTTGAGAATTCTATTGATGCATTGAGAACTTTAAGGGAGCTGAAGCTGCTTAGACATATTCGGCATGAGAATGTCATTGCTTTGAAAGATGTTATGATGCCAATCCACAAAACAAGTTTTAAGGATGTCTACCTGGTCTACGAACTCATGGATACAGATCTTCATCAAATTATTAAGTCCTCTCAGCCACTTTCCAATGATCATTGCAAATATTTCTTGTTTCAGCTCCTTCGAGGTCTTAAATACCTTCATTCAGCAAACATTCTTCACCGGGACTTGAAGCCTGGGAATCTGCTCGTCAATGCCAATTGCGATTTGAAGATATGCGACTTTGGGCTTGCACGAACTAATGGAGTTGATGGCCAGTTTATGACAGAGTATGTTGTCACTCGCTGGTATCGTGCACCGGAGCTCTTGTTATGCTGTGACAATTACGGAACCTCTATTGATGTCTGGTCAGTAGGGTGCATTTTTGCTGAGATTCTTGGTAGAAAGCCAATCTTCCCTGGGACTGAGTGTCTCAACCAGCTGAAACTAATTATAAGCGTTCTTGGAAGCCAGCATGAATCTCATCTTGAGTTTATTGATAATGCAAAAGCAAGGAGGTTTATCAAATCACTGCCCTATACTAGGGGCAGACACTTCTCTCAGCTATACCCACAAGCAGATCCATTAGCCATAGATTTGTTGCAAAAAATGCTTGTGTTCGATCCAACCAAGAGAATTACTGTCTTGGAAGCTCTCCAACACCCGTATATGGCTAGCCTATATGATCCAAGGTGCGACCCTCCTGCTCAGGTTCCCATCAGTCTCGACATAGATGAACATTGGGGAGAACCGATGATTAGGGAAATGTTTTGGAATGAGATGCTACATTATCATCCTGAAGCTGCTTCCGCCAATGCATAA 1107 0.421 MATLVEPPNRIKPKGKHYYTIWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIGNIFENSIDALRTLRELKLLRHIRHENVIALKDVMMPIHKTSFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTNGVDGQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVLGSQHESHLEFIDNAKARRFIKSLPYTRGRHFSQLYPQADPLAIDLLQKMLVFDPTKRITVLEALQHPYMASLYDPRCDPPAQVPISLDIDEHWGEPMIREMFWNEMLHYHPEAASANA* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0962 368 CDD STKc_TEY_MAPK 26 361 - -
Gso8g0962 368 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0962 368 Gene3D Phosphorylase Kinase; domain 1 19 350 - -
Gso8g0962 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 365 - -
Gso8g0962 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Gso8g0962 368 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0962 368 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0962 368 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gso8g0962 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 365 - -
Gso8g0962 368 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Gso8g0962 368 SUPERFAMILY Protein kinase-like (PK-like) 24 325 IPR011009 -
Gso8g0962 368 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0962 Gso-Chr8 8847898 8851145 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0962 1 368 MAP Kinase Gene Family AT2G18170 84.783 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gso8g0962 Pkinase 2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0962 K20537 - gmx:100783422 761.525