Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso8g0933 | ATGGCAGGCGTTTCTCTCAAGTGCGGTGACTGCGGTGCTCTGCTGAGAACCGTAGAAGAAGCGCAAGAGCACGCTGAACTCACCTCCCACTCCAACTTCTCCGAATCCACCGAACCGGTTCTCAACCTCATCTGCACCGCTTGCTCCAAACCCTGCCGATCCAAAACCGAGAGTGATTTGCACACGAAAAGAACCGGCCATACCGAGTTCGTTGACAAGACTTCCGAGGCCGTTAAACCGATTAGTTTGGAGGCTCCGAAGGTGGATGCAACTGCTTCATCGGAAAACCCTTCCGCTGCTGCATCCACTGACCAAAATGAAGAAATGGTTGTTCCTGAAGTGGACAAAAAGCTGCTTGAGGAACTTGAATCCATGGGGTTTTCAACGGCACGGGCAACGCGGGCGCTTCATTACTCTGGTAATGCTGGCCTTGAGTCTGCCGTAAATTGGATAGTAGAGCATGAGAATGATCCTGACATAGATCAGATGCCCTTGGTACCTACCAACACCAAAATTGAGGCTCCTAAACCTTCGCTTACCCCAGAAGAATTGAAGGCCAAACAGCAGGAACTAAGGGAGAGAGCTCGTAAGAAGAAAGAAGAGGAAGAGAAGAGAATGGAGAGGGAAAGAGAAAAGGAGAGAATTCGCATTGGCAAGGAGTTGCTGGAAGCAAAGAGGATTGAAGCTGACAATGAGAGGAAACGGTTGTTGGCCTTGAGAAAAGCAGAGAAAGAGGAAGAGAAAAGTGCTAGGGAGAAAATCAAGCAAAAGTTGGAAGAAGACAAGGCGGAAAGAAGGCGGAGACTTGGATTGCCTCCAGAGGAACCCTCAGCAGCCAAACCTTCACCTGCACCTGTTGTGGAGGAGAAAAAGAGTTTTGTGCCTGTTAGGCCTGCCACAAAAGCCGAGCAAATGAGAGAGTGCCTCCGTTCTCTCAAGCAGAACCACAAGGAGGATGACGCCAGAGTGAAGAGAGCATTCCAAACTCTTCTAACTTATGTAGGGAATGTTGCCAGAAATCCCGATGAGGAAAAGTTCAGGAAGATACGTCTTAGTAACCAATCTTTTCAGGACAGAGTTGGTTCCTTGAGAGGGGGAATTGAATTTCTAGAAAATTGTGGGTTTGAGAAGATCGATGGCGGCGAGTTTTTATTTTTGCCTAGGGACAAAATTGAGATGGCCGTCCTGAATTCAGCTGGATCTGAACTAGACTCTGCAATAAAGAATCCCTTCTTTGGAGTTCTTTAG | 1248 | 0.4808 | MAGVSLKCGDCGALLRTVEEAQEHAELTSHSNFSESTEPVLNLICTACSKPCRSKTESDLHTKRTGHTEFVDKTSEAVKPISLEAPKVDATASSENPSAAASTDQNEEMVVPEVDKKLLEELESMGFSTARATRALHYSGNAGLESAVNWIVEHENDPDIDQMPLVPTNTKIEAPKPSLTPEELKAKQQELRERARKKKEEEEKRMEREREKERIRIGKELLEAKRIEADNERKRLLALRKAEKEEEKSAREKIKQKLEEDKAERRRRLGLPPEEPSAAKPSPAPVVEEKKSFVPVRPATKAEQMRECLRSLKQNHKEDDARVKRAFQTLLTYVGNVARNPDEEKFRKIRLSNQSFQDRVGSLRGGIEFLENCGFEKIDGGEFLFLPRDKIEMAVLNSAGSELDSAIKNPFFGVL* | 416 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso8g0933 | 415 | ProSiteProfiles | Ubiquitin-associated domain (UBA) profile. | 113 | 154 | IPR015940 | - | |
Gso8g0933 | 415 | Gene3D | - | 307 | 405 | - | - | |
Gso8g0933 | 415 | CDD | UBA_PUB_plant | 113 | 161 | - | - | |
Gso8g0933 | 415 | SMART | PGNneu | 325 | 388 | - | - | |
Gso8g0933 | 415 | Pfam | PUB domain | 322 | 392 | IPR018997 | - | |
Gso8g0933 | 415 | MobiDBLite | consensus disorder prediction | 242 | 273 | - | - | |
Gso8g0933 | 415 | MobiDBLite | consensus disorder prediction | 83 | 109 | - | - | |
Gso8g0933 | 415 | MobiDBLite | consensus disorder prediction | 242 | 300 | - | - | |
Gso8g0933 | 415 | Pfam | UBA/TS-N domain | 119 | 151 | IPR015940 | - | |
Gso8g0933 | 415 | Coils | Coil | 219 | 264 | - | - | |
Gso8g0933 | 415 | CDD | PUB_UBA_plant | 309 | 415 | - | - | |
Gso8g0933 | 415 | PANTHER | F13M7.16 PROTEIN | 1 | 415 | - | - | |
Gso8g0933 | 415 | Gene3D | - | 115 | 161 | - | - | |
Gso8g0933 | 415 | SUPERFAMILY | UBA-like | 101 | 168 | IPR009060 | GO:0005515 | |
Gso8g0933 | 415 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 8 | 30 | IPR013087 | - | |
Gso8g0933 | 415 | SUPERFAMILY | PUG domain-like | 296 | 411 | IPR036339 | - | |
Gso8g0933 | 415 | Coils | Coil | 184 | 216 | - | - | |
Gso8g0933 | 415 | SMART | uba_6 | 115 | 153 | IPR015940 | - | |
Gso8g0933 | 415 | MobiDBLite | consensus disorder prediction | 172 | 212 | - | - | |
Gso8g0933 | 415 | MobiDBLite | consensus disorder prediction | 178 | 212 | - | - | |
Gso8g0933 | 415 | PANTHER | F13M7.16 PROTEIN | 1 | 415 | - | - | |
Gso8g0933 | 415 | MobiDBLite | consensus disorder prediction | 89 | 105 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso8g0933 | Gso-Chr8 | 8638305 | 8644782 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso8g0933 | 98 | 415 | C2H2 Transcription Factor Family | AT1G04850 | 79.062 | 2.52e-153 | 435 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso8g0933 | K24348 | - | gmx:100794687 | 721.079 |