Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0914 ATGCGTTCTTATGGCTTAACCGTACCGGGAAGCGACCACCGCTTCTGCGTGCCCACCGTATCTCAGGTGTTCTTTAGGCCCAACAGGCCCATTAACCGAATCGCGTTTCCCAAGGCCACCCTCAAGAACGACGGCTTCGTGGTGGACCTGAGCTTCTACGACCTTCTGGGAATACCGGAATCGGGTTCGGTAACGGAGATCAAGAACGCCTACAAGCAACTCGCCCGAAAGTACCACCCGGACGTGTCGCCTCCGGGTCGGGTCGAGGAGTACACAAAGAGGTTTATTCAGGTGCAGGAGGCCTACGAAACCCTGTCTGATCCTTCCAGAAGAGCTATGTACGACAAGGACATGGCCAAGGGCATTAACTTCGCCTTCAACGCCCGCAGACGCTATAATTACCACGATCAGGTAGTTGAACAAAAAAGTGAATGGAAAGCTAGGTGGAAATCTCAACTGTCAGAGCTGAAGAGAAAAAGTAACGGCAAGGATGCTGGAGGGAATATGTCATGGGCGGCACGAATGCGCCAACAGAGGGATGAATTGTCAAATGAATCATGA 561 0.5223 MRSYGLTVPGSDHRFCVPTVSQVFFRPNRPINRIAFPKATLKNDGFVVDLSFYDLLGIPESGSVTEIKNAYKQLARKYHPDVSPPGRVEEYTKRFIQVQEAYETLSDPSRRAMYDKDMAKGINFAFNARRRYNYHDQVVEQKSEWKARWKSQLSELKRKSNGKDAGGNMSWAARMRQQRDELSNES* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0914 186 CDD DnaJ 52 107 IPR001623 -
Gso8g0914 186 Pfam DnaJ domain 52 115 IPR001623 -
Gso8g0914 186 PRINTS DnaJ domain signature 53 71 IPR001623 -
Gso8g0914 186 PRINTS DnaJ domain signature 71 86 IPR001623 -
Gso8g0914 186 PRINTS DnaJ domain signature 90 110 IPR001623 -
Gso8g0914 186 PRINTS DnaJ domain signature 110 129 IPR001623 -
Gso8g0914 186 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 48 183 - -
Gso8g0914 186 SMART dnaj_3 50 110 IPR001623 -
Gso8g0914 186 SUPERFAMILY Chaperone J-domain 51 125 IPR036869 -
Gso8g0914 186 MobiDBLite consensus disorder prediction 156 186 - -
Gso8g0914 186 ProSiteProfiles dnaJ domain profile. 51 118 IPR001623 -
Gso8g0914 186 Gene3D DnaJ domain 47 152 IPR036869 -
Gso8g0914 186 ProSitePatterns Nt-dnaJ domain signature. 95 114 IPR018253 -
Gso8g0914 186 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 48 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0914 Gso-Chr8 8483922 8486626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0914 53 115 C2H2 Transcription Factor Family AT1G74250 43.939 8.53e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0914 - - gmx:100101903 382.874