Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0881 ATGGAGATCGTTCGTCCTCAGAATCGCAGAAACTCGTTTTCCTCTTCCAATGACGCCGTTTCTGCTCCCACCATTCCCCTCTATCGCTCTGCTCCCCCACTCGAAGTCAGGCTCGAGGATTTCGAGTCCTTCGCCATCGATCGCCTCCGAGTTCTCAAGGGGATTTCTGATGGTATGTCGCGTGGAAAAAAATCGGAAGAAATGGAGAATTTGGTAAAGGACCTGTGGAAAATGAATATGAGACATCAAGACGCATCTCAGGTTCTGAACAAGGATATTATATCACATTTTGTTCTACGTCTGGTGTATTGCAGAACGGAGGACTTGAGGAAATGGTTTCTTTCCACGGAATCTGCACTCTTTCGCTACCGTTTTCGCCTTCTGAATGCTGAAGCTCAGAGAGCAGTCATGGAAGAATTTGACCTTCCTTACAAGGCCGTTAGCAATGTGGAATTTGAGAGCATAAAAGAGAAATTGGGACAAGTTGCACGTTCTATGGGTCAGCCTTCGCCTACTGATGCTATCTTCTACAAGGTACCATTTGAAGAAGTTCCAGAGCTTGTTGCTGGACGGAAGGTGTTTATAAATCAAGGATATGCATATGTTGCAATGAATCAGATTGTTTCACTTGTAGCCACACTATTCCGTAGTCAACTGTCAAAGGCACTAATCCTTACAAACAGAAAATGGACATCTTCAGTTAGAGAGCAAGAGAAACATAGGTTGACTCCTATTGTGGAAGCCCTGTCCTCAAGTTATCTGGGTCCTGATTATTCTCAGTCAAAAGAATATGCTGATATATCATTAAAGGACATTGATCAAGTTGCCAAGAGCTCATTTCCTTTGTGCATGCGTCACCTATTTGATAAGCTGAAAGAGGATCATCATTTAAAGCATGGAGGGAGGATGCAACTAGGCCTCTTTCTGAAGGGTGTTGGCATAAATCTGGATGATGCACTTGCGTTTTGGAGGTCAGAGTTCTCTAAAAAGGTTGGTTTGGAGAAGTTTGAGAAACAATATGCATACAACATACGCCATAATTATGGAAAGGAAGGGAAGAGAACTGACTATACTCCCTATTCTTGTCAAAAGATTATTTCATCAACTCCTGGAGCTGGAGATCATCATGGTTGCCCTTATCGAAATTTCAGTGAAGAGAATCTAAGAGCTGCTCTCAGCAGAATGGGGGTAAACAGTTGGGCAATGGAAGATGTGATGGACAAAGTGAAAAATAGACATTATCAGTTGGCTTGCACCTTGACATTTGAAGCTCTTCATGGCATGACGTGTGATGCAGGGATTAACCATCCAAATCAATACTTCAGTGACAGTCAAAAGATATTAAAGCCAAAGAAGGATTCTTCAGCCTAA 1371 0.4267 MEIVRPQNRRNSFSSSNDAVSAPTIPLYRSAPPLEVRLEDFESFAIDRLRVLKGISDGMSRGKKSEEMENLVKDLWKMNMRHQDASQVLNKDIISHFVLRLVYCRTEDLRKWFLSTESALFRYRFRLLNAEAQRAVMEEFDLPYKAVSNVEFESIKEKLGQVARSMGQPSPTDAIFYKVPFEEVPELVAGRKVFINQGYAYVAMNQIVSLVATLFRSQLSKALILTNRKWTSSVREQEKHRLTPIVEALSSSYLGPDYSQSKEYADISLKDIDQVAKSSFPLCMRHLFDKLKEDHHLKHGGRMQLGLFLKGVGINLDDALAFWRSEFSKKVGLEKFEKQYAYNIRHNYGKEGKRTDYTPYSCQKIISSTPGAGDHHGCPYRNFSEENLRAALSRMGVNSWAMEDVMDKVKNRHYQLACTLTFEALHGMTCDAGINHPNQYFSDSQKILKPKKDSSA* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0881 456 Pfam Eukaryotic and archaeal DNA primase, large subunit 176 441 IPR007238 GO:0006269
Gso8g0881 456 PANTHER DNA PRIMASE LARGE SUBUNIT 1 452 - -
Gso8g0881 456 MobiDBLite consensus disorder prediction 1 20 - -
Gso8g0881 456 PIRSF DNA_primase_large 2 456 IPR016558 -
Gso8g0881 456 PANTHER DNA PRIMASE LARGE SUBUNIT 1 452 IPR007238 GO:0006269
Gso8g0881 456 CDD PriL_PriS_Eukaryotic 27 444 IPR016558 -
Gso8g0881 456 Gene3D - 3 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0881 Gso-Chr8 8198846 8205765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0881 1 455 Core DNA Replication Machinery Family AT1G67320 66.667 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0881 K02685 - gmx:100816023 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1270 5 36246010 36254138 Gso8g0881 8 8198846 8205765 GST