Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0845 ATGATGGCCGTTTTGGATGCTCTGTTGGGAACGGTCAATGTGGCATTCTTGTATGCCATTTTGATATGGCTTTTGGTGGATAGTTTGAGACAAAGCACTCGTAATAACCATGCTCGTGTTGTACTGCATTATTTCAAACGAGGAGGACCAATGGTTTTCGCTGTATTCACTGTTCTATCCTGTGCTGTTATTTCTGTTATGAACATTGCCCTTGCCTTTTACCAATACAGCTCTAGGAGAATAATCGGATTTAACTCTGTTTCCTTGGTTCTAACTTGGGTTTTGGCCACTATAGTTTCGTTTTATTCAATGAGGACTAAAGTGAGGGAGAACAAGAGGTTCAGGTTCCCTCTTGTTCTGATCCTATGGTGGTTTTTTGCTTGTATCATAGATGCACTATTGCTGTCTTCAAAGCTGGTAAAAAAATTTGAATCAATCAACTTGTGGTTTTTCTTGTCAAAGGATAACGTAGTAGATTCGGTTTCTTTGCCTTTGTTGGTACTTCTTTGTTTCAATGTGTGTGCAAGGGAAAACAGTGATTTGGAACAAGAACAGATGTTACTTCAAAAAGAGGAGGAATCTTCTATGGAGGAAGAAGACGAACAGGCCTTTACAAATGCAAGCATGTGGAGCAAACTTGCATTTCGATGGTTGAATCCCATTTTTAAAACGGGTCGGATTCAAAAACTTGAACTTGGTCACATTCCTCCTGTTCCTCCTTCTGAAACGGCAGAAAATGCTTCTTCAGTGTTGGAAGAATCACTTCGCAAACAGAAACTTAAAGGAGGTTCCTTGACAAAAGCTATTGCCTATTCTATATGGAAGTCCTTGGCCTTAAACGCAGTTTTAGCTGGTGTTAACACAGGTGCCTCTTATATAGGTCCCTTGTTGATAACAAATTTTGTGAATTTTTTACTGGGGGATAATGGTGATTCAAGCATCCAATATGGATTGGTTCTTGCATTTATTTTTTTCCTTGCAAAGACTGCGGAGTCACTGAGTCAAAGACAATGGTACTTTGGTGCTCAACGAATTGGAATCCGGGTGCGTGCGGCTCTTACATCTCTAATTTATAGCAAGTCCCTATTGATGAAGTGTGCTGGACCAACACAAGGTAAAATCATCAATTTGATTAATGTGGATGTTGAAAGAATTGGGGACTTCTGCTGGTACATTCATGGAGTTTGGTTGCTTCCAGTTCAGGTCATTTTGGCCTTGGTAATCTTATACATAAATCTGGGTGGTACTCCTTCTTTTGCTGCATTTGGTGTCACCATATTGGTCATGGTGTGTAACACACCTTTGGCCAATAAGCAAGAAGGTTTGCACTCCAAGATTATGGAAGCTAAGGATTCAAGAATTAAAGTGACATCAGAGACCATGAAAAACATTAGAATTCTAAAATTGCATTCATGGGAAACTTCATTCTTGCAGAAACTCCTCCAACTTAGGGAAACTGAGAGGAGGTGGCTGCAGAAATACCTCTATACATGCTCAGCAGTAGCCACACTATTCTGGACATCTCCAACTTTAGTTTCTGTTGTCACCTTTGGTGCTTGTATACTGGTGAAAACAGAACTGACGACAGCTACAGTACTCTCAGCTTTAGCGACCTTTCGTATTCTGCAGGAACCAATCTACAACTTACCGGAGCTTATCTCCATGATCATTCAAACAAAAGTCTCCGTTGATCGAATCCAGGAGTTCATTAAGGAAGACGATCAAAACCAATTCATAAACAGGCATAGTTCAAAGATTTCAGCAGTTGCTATTGAAATTAAGCCGGGCGAATATGTATGGGAAACAAATGATCAAACCCACAAGAATCCAACAATTCAAATTACAGGAAAGTTAGTGATAAAGAAAGGTCAGAAGGTAGCAATTTGTGGGTCAGTGGGGTCCGGTAAATCAAGTTTGATATGCTGTTTGCTTGGGGAGATTCCATTAGTTTCTGGGGCAGTAACCAAAGTCTATGGGACTAGAAGTTATGTGCCCCAAAGTCCATGGATTCAGTCTGGAACTGTAAGAGAGAATATATTGTTTGGCAAGCAAATGAAGAAGGACTTTTATGAAGATGTTTTGGATGGCTGTGCTTTGCACCAAGACATCAACATGTGGGGTGATGGAGATTTGAACCCGGTGGAGGAGAGGGGCATAAACTTGAGTGGTGGGCAGAAACAGCGGATTCAATTGGCAAGGGCTGTTTACAATGATTCTGATATTTATTTCCTTGATGATCCTTTTAGTGCTGTTGATGCTCATACCGGAACTCATTTGTTTAAGAAATGTCTCATGAAACTTTTATATGATAAAACGGTTGTTTATGCTACCCATCAACTGGAATTCTTGGAAGCTGCAGACCTCATTTTGGTAATGAAAGATGGAAAAATAGTGGAGTCAGGAAGCTATAAAGATCTTATAGCATGTCCCAACTCTGAACTTGTTCAACAAATGGCTGCTTATCAAGAAACATTACACCAAATAAATCCATGCCAAGAAGATGATTCTGCTAGCTGCAGACCCTGCCAAAAAAATCAAATTGAAGTTGCTGAAGAAAATATTCAAGAGATCATGGAGGATTGGGGAAGAAGTAAAGAAGAGGAAGCAGAGACGGGTAGAGTGAAATGGAGTGTTTACTCAACTTTTGTCATATCTGCTTATAAAGGAGTGCTTGTTCCGGTTATTCTTCTCTGCCAAATTCTCTTTCAAGTTATGCAGATGGGAAGCAATTATTGGATTTCATGGGCTACAGAGCAGAAAGGCAGGGTCAACAACAAACAGCTTATGGGAACATTTGCTCTTCTATCTTTTGGTGGCACCATCTTCATACTGGGAAGGACTGTTTTAATGGCAGCTGTTGCTGTGGAAACTGCTCAACGCCTTTTTCTTGGAATGATCACATCAGTTTTCAGGGCACCTGTTTCATTTTTTGACACCACACCTTCAAGCCGAATTATGAGTAGGTCATCAACGGATCAAAGTACTGTAGACACAGACATACCATACAGATTAGCTGGACTAGTGTTTGCACTTATCCAGTTATTGAGTATCATTGTGCTAATGTCTCAAGTTGCATGGCAAGTCATTCTCCTCTTTTTTGTGGTGTTTGCAATTTCCATTTGGTATCAGGCTTATTACATCACAACAGCCAGGGAATTAGCCAGGATGGTTGGGATTCGAAAGGCACCAATCTTGCATCACTTCTCAGAATCAATTGCCGGGGCTGCTACAATCCGCTGTTTCAATCAAGAGAAACTATTCATGACCAAGCTTAAGGCTCTAATTGACGATTATTCTCGGGTAGCCTTTCACAATTTTGGCACCATGGAATGGCTGTCTGTCCGAATCAATTTCCTCTTCAATTTGGTCTTCTATTTTGTACTTGTCATCTTGGTTACTCTTCCAAGGTCTACCATTGATCCAAGCTTGGCGGGTTTGGTAGCTACTTATGGTTTGAACTTGAATGTCCTTCAGGCTTGGGTGATATGGAATCTTTGCAATGTTGAGAACAAAATGATATCAGTTGAGAGAATATTGCAGTTCTCTAGCATACCAAGTGAAGCGCCATTAATTATTCAAGATTGCAGACCTGAACCAGAGTGGCCAAAGGAGGGAAAAGTTGAACTACGTAACCTTCATATACGGTATGACCCTGCTGCTCCTATGGTCCTCAAAGGTGTCACTTGTGTCTTCCCCGCACAAAAGAAAATTGGTGTAGTAGGCAGGACAGGGAGTGGAAAATCTACTCTGGTGCAAGCCCTCTTTCGAGTGGTGGAGCCTTTGGAAGGATGTATACTTATTGATGGTGTAGATATTTCCAAGATTGGTCTGCAAGATTTAAGATCTAAGCTTGGTATAATTCCTCAGGATCCAACCTTGTTTCTAGGTACTGTAAGGACTAACTTGGATCCACTAGAACAACATGCTGATCAAGAACTTTGGGAGGTTCTCAGCAAGTGCCATCTTGCTGAAATAGTGAGGCGGGATCCAAGACTTCTTGATGCACCAGTGGCCGAGAATGGAGAGAATTGGAGTGTTGGACAAAGGCAGCTTGTATGCCTTGCTAGGTTACTACTGAAGAAAAGAAGAATTTTGGTCCTAGATGAGGCAACTGCATCAATTGACACAGCCACTGACAATTTAATTCAGAAGACAATTAGGGAAGAAACAAATGGATGTACAGTTATTACAGTAGCGCATAGAATTCCTACAGTTATTGATAATGATCGGGTTTTGGTCCTTGATGAAGGGACAATTGTAGAGTATGATGAACCAGCTCAATTGCTGCAGAACAATTCTTCTTCATTCTCAAAGTTAGTCTCAGAATTTTTGAGGAGATCATCCCAAAGTAGCTTCCAGAAAAGATAG 4368 0.4084 MMAVLDALLGTVNVAFLYAILIWLLVDSLRQSTRNNHARVVLHYFKRGGPMVFAVFTVLSCAVISVMNIALAFYQYSSRRIIGFNSVSLVLTWVLATIVSFYSMRTKVRENKRFRFPLVLILWWFFACIIDALLLSSKLVKKFESINLWFFLSKDNVVDSVSLPLLVLLCFNVCARENSDLEQEQMLLQKEEESSMEEEDEQAFTNASMWSKLAFRWLNPIFKTGRIQKLELGHIPPVPPSETAENASSVLEESLRKQKLKGGSLTKAIAYSIWKSLALNAVLAGVNTGASYIGPLLITNFVNFLLGDNGDSSIQYGLVLAFIFFLAKTAESLSQRQWYFGAQRIGIRVRAALTSLIYSKSLLMKCAGPTQGKIINLINVDVERIGDFCWYIHGVWLLPVQVILALVILYINLGGTPSFAAFGVTILVMVCNTPLANKQEGLHSKIMEAKDSRIKVTSETMKNIRILKLHSWETSFLQKLLQLRETERRWLQKYLYTCSAVATLFWTSPTLVSVVTFGACILVKTELTTATVLSALATFRILQEPIYNLPELISMIIQTKVSVDRIQEFIKEDDQNQFINRHSSKISAVAIEIKPGEYVWETNDQTHKNPTIQITGKLVIKKGQKVAICGSVGSGKSSLICCLLGEIPLVSGAVTKVYGTRSYVPQSPWIQSGTVRENILFGKQMKKDFYEDVLDGCALHQDINMWGDGDLNPVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGTHLFKKCLMKLLYDKTVVYATHQLEFLEAADLILVMKDGKIVESGSYKDLIACPNSELVQQMAAYQETLHQINPCQEDDSASCRPCQKNQIEVAEENIQEIMEDWGRSKEEEAETGRVKWSVYSTFVISAYKGVLVPVILLCQILFQVMQMGSNYWISWATEQKGRVNNKQLMGTFALLSFGGTIFILGRTVLMAAVAVETAQRLFLGMITSVFRAPVSFFDTTPSSRIMSRSSTDQSTVDTDIPYRLAGLVFALIQLLSIIVLMSQVAWQVILLFFVVFAISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGAATIRCFNQEKLFMTKLKALIDDYSRVAFHNFGTMEWLSVRINFLFNLVFYFVLVILVTLPRSTIDPSLAGLVATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSSIPSEAPLIIQDCRPEPEWPKEGKVELRNLHIRYDPAAPMVLKGVTCVFPAQKKIGVVGRTGSGKSTLVQALFRVVEPLEGCILIDGVDISKIGLQDLRSKLGIIPQDPTLFLGTVRTNLDPLEQHADQELWEVLSKCHLAEIVRRDPRLLDAPVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTATDNLIQKTIREETNGCTVITVAHRIPTVIDNDRVLVLDEGTIVEYDEPAQLLQNNSSSFSKLVSEFLRRSSQSSFQKR* 1456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0845 1455 CDD ABCC_MRP_domain2 1205 1425 - -
Gso8g0845 1455 Pfam ABC transporter 618 748 IPR003439 GO:0005524
Gso8g0845 1455 Pfam ABC transporter 1224 1372 IPR003439 GO:0005524
Gso8g0845 1455 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1207 1441 IPR003439 GO:0005524
Gso8g0845 1455 SMART AAA_5 622 796 IPR003593 -
Gso8g0845 1455 SMART AAA_5 1233 1424 IPR003593 -
Gso8g0845 1455 Pfam ABC transporter transmembrane region 279 545 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso8g0845 1455 Pfam ABC transporter transmembrane region 896 1134 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso8g0845 1455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 617 809 IPR027417 -
Gso8g0845 1455 SUPERFAMILY ABC transporter transmembrane region 894 1187 IPR036640 GO:0005524|GO:0016021
Gso8g0845 1455 PANTHER OS01G0902100 PROTEIN 117 1450 - -
Gso8g0845 1455 ProSitePatterns ABC transporters family signature. 721 735 IPR017871 GO:0005524
Gso8g0845 1455 Gene3D ABC transporter type 1, transmembrane domain 859 1188 IPR036640 GO:0005524|GO:0016021
Gso8g0845 1455 CDD ABCC_MRP_domain1 591 796 - -
Gso8g0845 1455 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 894 1170 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso8g0845 1455 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 278 558 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso8g0845 1455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1199 1433 IPR027417 -
Gso8g0845 1455 CDD ABC_6TM_ABCC_D2 892 1182 IPR044726 GO:0140359
Gso8g0845 1455 CDD ABC_6TM_ABCC_D1 279 566 IPR044746 GO:0140359
Gso8g0845 1455 Gene3D - 1190 1443 IPR027417 -
Gso8g0845 1455 Coils Coil 840 860 - -
Gso8g0845 1455 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 593 819 IPR003439 GO:0005524
Gso8g0845 1455 Gene3D ABC transporter type 1, transmembrane domain 266 569 IPR036640 GO:0005524|GO:0016021
Gso8g0845 1455 SUPERFAMILY ABC transporter transmembrane region 272 571 IPR036640 GO:0005524|GO:0016021
Gso8g0845 1455 Gene3D - 570 838 IPR027417 -
Gso8g0845 1455 Coils Coil 181 201 - -
Gso8g0845 1455 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 117 1450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0845 Gso-Chr8 7849741 7856406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0845 610 841 Calmodulin-binding Proteins AT2G36910 29.032 1.76e-20 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0845 - - gmx:100809063 2788.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1229 5 35816366 35822818 Gso8g0845 8 7849741 7856406 GST