Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0841 ATGGAGTTCATATCAAGAGAAACCATCAAACCCTCGAACCCCACCCCTCCTCACCTCAGAATCCATCCTCTCTCCTTCATAGATCACATCGTTTTTCGCAACTACATCCCCTTGCTTTTCTTTTACAACTCCCCAAACCATGAGCAAGCATCCACAATATCAAAACTCAAGAAATCCTTATCCCAAGTTTTATCCCGATACTACCCTTTTGCAGGCAAGCTCAGAGATCAAGTTTCCATCGACTGCAACGACCAAGGAGTGTCCTTTCTAGTCACAAGGCTGAGATGCAACCTATCAACGATCCTCCAAAACCCCACAGAAGAATCGTTGAACCCTTTGTTCCCAGATGAACTACAGTGGAAACCTATGAGTAGCAGTAGTAGTTCAAGTATAATAGCCATACAAATAAACTGTTTTGCATGCGGAGGAATAGCAATGAGCGTGTGCATGTGTCACAAAGTTGGAGACGCGGCCACACTTTCAAATTTCATCAACGACTGGGCCACACTTAACCGCCAAAAAGAACTAGAACAAGAAACAGCAGAGTTGTTATTATTACCCTTCCCAGTACCCGGGGCTTCACTTTTCCCGCAAGAAAACTTGCCCGTTTTCCCAGAAGTTTTGTTCGTGGAAAACGACACCGTATGCAGAAGGTTTGTCTTCGAGGCCTCCAAGATCGACTCCCTCAAATCCACGGTGTCTTCCCACAACGTCCCGAACCCCACGCGCGTAGAAGTCGTCAGCGCGTTGATTTACAACCGCGCGGTTTCGGCTCTAGGGTTGATTTCCAAGACGACGTCGTTCCGCACCGCCGTGAACCTTCGCACGAGAACGGTTCCGCCGCTCCCGGAGAAGAGCGTGGGGAACTTGGTCTGGTTCCTCTTCGTGCTTAGCCCTTGGGAAACGGAGCTGCATGAGTTGGTGCTCAAAATGAAACAAGGCTTAACCGAGTTTTGTGACACGTATGCGAAGAAATTTGGAGGGGAGGATAAGGACATGTCGTTCATCTCCGAGTGTCTGAAGCAAGCTGCTTCGGTTCCCGAACCACAGCCTGGTGGTTCGGATGATGAGGAGAGTCAAATAGTAACTATGTTTTGTTGTGCGAGTTGGTGCAGGTTTCCGATGTATGAAGCGGATTTTGGTTGGGGGAAACCGGTGTGGTTCACCACTAGTGAGTGTCCCGTGAAGAATAGCATTGTTTTGATGGATACCAGAGATGGGGGTGGGATTGAAGCCATCGTGAACATGGAGGAGCAAGACATGGCCAGGTTTGAGCGTGACGTGGAGCTTCTGAAATATGCTTCTCTTAATCCTGCTGTTGGACATGGTAATTAA 1335 0.4839 MEFISRETIKPSNPTPPHLRIHPLSFIDHIVFRNYIPLLFFYNSPNHEQASTISKLKKSLSQVLSRYYPFAGKLRDQVSIDCNDQGVSFLVTRLRCNLSTILQNPTEESLNPLFPDELQWKPMSSSSSSSIIAIQINCFACGGIAMSVCMCHKVGDAATLSNFINDWATLNRQKELEQETAELLLLPFPVPGASLFPQENLPVFPEVLFVENDTVCRRFVFEASKIDSLKSTVSSHNVPNPTRVEVVSALIYNRAVSALGLISKTTSFRTAVNLRTRTVPPLPEKSVGNLVWFLFVLSPWETELHELVLKMKQGLTEFCDTYAKKFGGEDKDMSFISECLKQAASVPEPQPGGSDDEESQIVTMFCCASWCRFPMYEADFGWGKPVWFTTSECPVKNSIVLMDTRDGGGIEAIVNMEEQDMARFERDVELLKYASLNPAVGHGN* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0841 444 PANTHER F21J9.9 3 440 - -
Gso8g0841 444 Pfam Transferase family 2 430 - -
Gso8g0841 444 Gene3D - 212 435 IPR023213 -
Gso8g0841 444 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 3 440 - -
Gso8g0841 444 Gene3D - 1 202 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0841 Gso-Chr8 7805770 7807415 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0841 25 426 Monolignol Biosynthesis Gene Families AT5G48930 23.380 1.08e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0841 - - gmx:100806928 881.708