Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0839 ATGGATTTATCTTCTCTCTTTCTTGTTTTAATCCCTCTATTGACATCACTTGCTGTTTGCCAACTTGAAGAATTTGTTAGCATTGATTGTGGAGGGACAAGTAACTACAGTGATACCAGCACGGGGTTGGCATGGATCTCAGATTCTAGTATCATGCAACATGGCATTTCAGTGGAAGTGGAAAATCCAAATGGAAGAAGCATGTTGCAGTATCAAAAGCGAAGAGACTTTCCCATAGACAGCAACAAGAAGTACTGTTACACACTAAGCACAGAAGAGAGAAGAAGATATTTGGTGAGAGCAACGTTTCAATATGGAAGCTTGGACAGTGGAGACACATACCCTCAGTTTCAGCTCTACTTGGATGCAACAAAATGGGCTACTGTGTCAATTTATGATGCCTCAAGAGTATATGTTAAGGAAATGATCATCAGGGCACCCTCAAATTCTATTGATGTCTGCATGTGTTGTGCTACGACTGGTTCTCCTTTTATATCTACCCTTGAGTTGCGACCCTTGAATCTTTCAATGTATGCCACAGATTTTGAGGACAATTTCTTCTTGGAAGTTGCTGCAAGAATAAACTTTGGTGCTCCAACTGAAGATGCTGTCAGGTACCCGGATGACCCGTATGATAGAATTTGGGATTCTGATCTTATTAAAAGGCAAAATTATCTTGTTGGGGTGGCGCCAGGCACAGAAAGAATTAGCACTACGAAGAACATAGATATAGAGACTAGAGAATACCCACCTGTTAAAGTTATGCAAAGTGCAGTTGTTGGCACAAAAGGAGTACTCAGCTACAGATTGAACCTGGAAGACTTCCCCGCCAATGCTCGAGCTTATGCATATTTTGCAGAAATTGAAGATTTGGGTCAGAATGAGAGTCGAAAATTCAAACTAAAGCAACCTTATATAGCTGACTATAGCAATGCAGTAGTTAACATTGCTGAGAATGCCAATGGGAGCTACACTTTATATGAACCAAGTTACATGAATGTGACTCTCGAATTTGTTTTATCATTCTCCTTTGTTATGGCCCCAGATTCTACTCGAGGACCTCTTCTAAATGCATTGGAAATAAGTAAATATGTACAGATTGCTTCAAAGACAGACAAGCAAGACTCAACCGTTGTAACTGCATTTCAATTATTGTCTGCTGAAAGTTCCCAAACAAACAAAGGCGATCCTTGTGTCCCAACTCCCTGGGAATGGGTGAATTGTAGTACCACCACGCCTCCAAGAATTACTAAAATAATTCTTTCGAGGAGGAATGTGAAGGGTGAAATCTCACCTGAGCTTAGCAATATGGAAGCTTTGACAGAGTTGCATTTAGAGAACAACAAGTTGACAGGTCGACTACCATCTTACATGGGTAGTTTGCCAAGCTTACAAGCATTGTTCATACAGAACAACTCATTTAGCGGGGAAATACCAGCCGGATTAATATCTAAAAAAATCGTTTTCAACTATGATGGTAATCCTGAACTATACAGAGGAAACAAGAAGCATTTTAAGATGGTTGTGGGAATTTCAATTGGAGTACTAGTGATTCTATTAATATTATTCTTAGTAAGTTTGGTGCTATTGCTTAAAACACGTAGAAAGGCATCTCAAAAGAAACGTGAGGAAAAAGGCATTTCTGGACGCACTAATAGTAAACCTGGATACTCATTTCTTCGGGGTGGAAATTTAATGGATGAAAATACTACTTGCCATATTACACTCTCAGAGTTGAAAGAAGCTACTGACAATTTTTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAAATGAGAGATGGAAAAGAAATAGCAGTTAAAAGTATGAATGAATCATCTTGTCACGGGAACCAGCAATTTGTTAATGAGGTGGCCCTCCTATCCAGAATTCATCACAGAAATTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATGTCAGCATATTCTGGTTTACGAGTATATGCACAATGGCACTTTACGCGATCACATTCATGAGAGTTCCAAGAAGAAGAACTTGGACTGGTTAACTCGTCTTCGTATTGCAGAAGATGCCGCTAAAGGTCTTGAATATTTACACACAGGATGCAATCCAAGTATCATTCACCGTGACATAAAGACAGGAAATATTCTCCTAGACATCAATATGAGAGCAAAAGTATCAGATTTTGGACTCTCTAGATTAGCCGAAGAAGATTTAACCCATATATCAAGCATTGCACGAGGAACTGTTGGCTACTTGGATCCTGAGTACTATGCAAGTCAGCAATTGACAGAAAAGAGTGACGTGTATAGTTTTGGAGTTGTTCTGCTAGAACTGATATCTGGAAAAAAACCTGTGTCATCTGAAGATTATGGTGACGAAATGAACATTGTTCACTGGGCAAGATCCTTAACTCGTAAAGGAGATGCAATGAGCATCATTGACCCTTCTCTTGCTGGAAATGCCAAAACCGAGTCCATTTGGAGGGTGGTAGAAATTGCCATGCAGTGTGTAGCACAACATGGTGCCTCCAGGCCAAGGATGCAAGAAATCATTTTGGCTATACAAGATGCAACCAAGATTGAAAAAGGAACAGAAAATAAGCTAAAATCATCATCATTTTCAGGTAGTAGTAGTTCAAAGCCACAACATTCTTCCCGGAAAACTCTACTCACAAGCTTTCTTGAAATTGAGAGCCCTGACGTGTCAAATGGTTGCCTTCCATCGGCAAGATAA 2733 0.397 MDLSSLFLVLIPLLTSLAVCQLEEFVSIDCGGTSNYSDTSTGLAWISDSSIMQHGISVEVENPNGRSMLQYQKRRDFPIDSNKKYCYTLSTEERRRYLVRATFQYGSLDSGDTYPQFQLYLDATKWATVSIYDASRVYVKEMIIRAPSNSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEDNFFLEVAARINFGAPTEDAVRYPDDPYDRIWDSDLIKRQNYLVGVAPGTERISTTKNIDIETREYPPVKVMQSAVVGTKGVLSYRLNLEDFPANARAYAYFAEIEDLGQNESRKFKLKQPYIADYSNAVVNIAENANGSYTLYEPSYMNVTLEFVLSFSFVMAPDSTRGPLLNALEISKYVQIASKTDKQDSTVVTAFQLLSAESSQTNKGDPCVPTPWEWVNCSTTTPPRITKIILSRRNVKGEISPELSNMEALTELHLENNKLTGRLPSYMGSLPSLQALFIQNNSFSGEIPAGLISKKIVFNYDGNPELYRGNKKHFKMVVGISIGVLVILLILFLVSLVLLLKTRRKASQKKREEKGISGRTNSKPGYSFLRGGNLMDENTTCHITLSELKEATDNFSKKIGKGSFGSVYYGKMRDGKEIAVKSMNESSCHGNQQFVNEVALLSRIHHRNLVPLIGYCEEECQHILVYEYMHNGTLRDHIHESSKKKNLDWLTRLRIAEDAAKGLEYLHTGCNPSIIHRDIKTGNILLDINMRAKVSDFGLSRLAEEDLTHISSIARGTVGYLDPEYYASQQLTEKSDVYSFGVVLLELISGKKPVSSEDYGDEMNIVHWARSLTRKGDAMSIIDPSLAGNAKTESIWRVVEIAMQCVAQHGASRPRMQEIILAIQDATKIEKGTENKLKSSSFSGSSSSKPQHSSRKTLLTSFLEIESPDVSNGCLPSAR* 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0839 910 ProSitePatterns Protein kinases ATP-binding region signature. 590 612 IPR017441 GO:0005524
Gso8g0839 910 Gene3D Phosphorylase Kinase; domain 1 563 659 - -
Gso8g0839 910 ProSiteProfiles Protein kinase domain profile. 584 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0839 910 PANTHER - 432 878 - -
Gso8g0839 910 PANTHER - 11 445 - -
Gso8g0839 910 Pfam Malectin-like domain 28 363 IPR024788 -
Gso8g0839 910 SMART serkin_6 584 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0839 910 PANTHER OS07G0107800 PROTEIN-RELATED 432 878 - -
Gso8g0839 910 PANTHER OS07G0107800 PROTEIN-RELATED 11 445 - -
Gso8g0839 910 MobiDBLite consensus disorder prediction 867 888 - -
Gso8g0839 910 MobiDBLite consensus disorder prediction 865 888 - -
Gso8g0839 910 SUPERFAMILY Protein kinase-like (PK-like) 571 851 IPR011009 -
Gso8g0839 910 SUPERFAMILY L domain-like 399 482 - -
Gso8g0839 910 Pfam Protein tyrosine and serine/threonine kinase 586 851 IPR001245 GO:0004672|GO:0006468
Gso8g0839 910 Gene3D Transferase(Phosphotransferase) domain 1 660 877 - -
Gso8g0839 910 Gene3D Ribonuclease Inhibitor 376 499 IPR032675 -
Gso8g0839 910 CDD STKc_IRAK 590 851 - -
Gso8g0839 910 ProSitePatterns Serine/Threonine protein kinases active-site signature. 705 717 IPR008271 GO:0004672|GO:0006468
Gso8g0839 910 MobiDBLite consensus disorder prediction 540 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0839 Gso-Chr8 7785228 7791051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0839 3 910 Receptor kinase-like Gene Family AT1G67720 66.239 0.0 1228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso8g0839 Malectin_like 4.7e-89 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0839 - - gmx:100790944 1654.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1224 5 35744542 35750288 Gso8g0839 8 7785228 7791051 GST