Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0825 ATGGAGAACGAGAAAATTCCATCAGTTTATGAACATGGTAGCTGTAGCAGAAGTGCTGAACCTGAACCTAGACCTAATGATTCCCGTATTCTGGGAAGAAAATACCATTTATACTGGGCGCTGGGTTTCGGAAGTTCCGCCATTGTGAAGCTTGCAAGTGACGTTACCACCGGACACGGCGTGGCCATCAAAATTTTCGACAAGGAATTCATTGACGGAAAGAAAAAATCTGTCAAGAAACGAATGAAAATCGCGCTTGAACGAGAAATATCAGCAATGACAATGCTTAGATCACACCCTAATGTCGTGCGTATAATTGAGGTGATGGCTACCACGACAAGGGTGTATATTGTAATGGAACTTGTAGTTGGTGGTGCAACACTGCTTGATAAAATTGGACGAACTTCGGGAATGTCAGAAACCCAAGCTAGACAGTATTTTCATCAGCTTATATGTGCTGTGGATTACTGTCACAGTAGAGGTGTTATCCATAGAGACCTGAATCCGTCAAATTTGTTGCTTGCTGCTGATGGAGTGCTTAAAGTGTCAGATTTTGGAATGACTGCACTGCCTCAACAAGCTAGACAAGATGGGCTGCTTCACTCAGCATGTGGTGCGCTTGATTATAAAGCCCCAGAGGTGATAAGGAACCGGGGCTATGAGGGTGAAAAGGCTGATATATGGTCATGTGGTGCTATTCTGTTTCATTTAGTTGCTGGTGATGTGCCCTTCACAAATGTATATGACGATCGCAATACTAAAATTAGACAGATTCTCCAGGCTGACTTCATCTGTCCCTCATTTTTCTCTGCAAGTTTAGTAGCACTGATTAGGAGAATCCTTGATCCCAATCCTACTACACGGATTACAATGAATGAGATCTTTGAGAATGAATGGTTCATGGAGAATTATGAGCCTCCTAGATTTTACAGGCAAAATTTTACTTTTGGTCATGATTCACAAAAGCGTGTTGCTAAGGTGCATGGAGCAGGGTCTTCAGCACCACCAGTGCCAGTCATGAATGCGTTTGAGATTTTGAATACATTTCTGGGCTACTACCTTATTATTGGAAAGCTTTTAAACCAGCTGGTACAACATAAAAGGGAAACAAGCTTCATATCCCAAAATCCCGTGGATGAGATAATTGATGGAATTGAGCGTGTTGCTGGGATTATGGGATTTGATGTTAAGAGGATAAACAGTTTTCGGATGAGTATTGAAGGAGGGGCAAATGCTAGACGCAAAGGTCATCTTGCTATATTCATTAAGATTTCCGAGATAGCACAACCCTTTCACATGGTTGAGCTTCGGAAGGCTGAAGGAGATGTTCTGGAATTTCATAACTTCTGCAAGCATATATATGCTGCGTTGTCAGATTTTATTTGGAAAGGGAGAGCAGAACCTATAGATACAGAAACAGATGACCCTCCCTTTCACGCGGTTGAGATTCGAAAGGCCGGTGGCGATAATGAGAAATTTGACAAGCGTTCCAAAATTTAG 1500 0.422 MENEKIPSVYEHGSCSRSAEPEPRPNDSRILGRKYHLYWALGFGSSAIVKLASDVTTGHGVAIKIFDKEFIDGKKKSVKKRMKIALEREISAMTMLRSHPNVVRIIEVMATTTRVYIVMELVVGGATLLDKIGRTSGMSETQARQYFHQLICAVDYCHSRGVIHRDLNPSNLLLAADGVLKVSDFGMTALPQQARQDGLLHSACGALDYKAPEVIRNRGYEGEKADIWSCGAILFHLVAGDVPFTNVYDDRNTKIRQILQADFICPSFFSASLVALIRRILDPNPTTRITMNEIFENEWFMENYEPPRFYRQNFTFGHDSQKRVAKVHGAGSSAPPVPVMNAFEILNTFLGYYLIIGKLLNQLVQHKRETSFISQNPVDEIIDGIERVAGIMGFDVKRINSFRMSIEGGANARRKGHLAIFIKISEIAQPFHMVELRKAEGDVLEFHNFCKHIYAALSDFIWKGRAEPIDTETDDPPFHAVEIRKAGGDNEKFDKRSKI* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0825 499 SMART serkin_6 35 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0825 499 SUPERFAMILY Protein kinase-like (PK-like) 26 313 IPR011009 -
Gso8g0825 499 MobiDBLite consensus disorder prediction 1 27 - -
Gso8g0825 499 CDD CIPK_C 341 451 - -
Gso8g0825 499 Pfam Protein kinase domain 37 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0825 499 Gene3D Kinase associated domain 1, KA1 337 463 - -
Gso8g0825 499 ProSiteProfiles Protein kinase domain profile. 35 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0825 499 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 23 31 466 - -
Gso8g0825 499 ProSitePatterns Protein kinases ATP-binding region signature. 41 64 IPR017441 GO:0005524
Gso8g0825 499 Gene3D Transferase(Phosphotransferase) domain 1 27 336 - -
Gso8g0825 499 PANTHER SERINE/THREONINE KINASE 31 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0825 Gso-Chr8 7651242 7658762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0825 28 466 CBL-interacting serine-threonine protein kinases AT1G01140 44.176 8.71e-121 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso8g0825 Pkinase 5.6e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0825 - - gmx:102667541 1003.82