Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0824 ATGGAGCAGCCAAGTGTGGCGGTTCTGCCATGGATGCGTCACCCTGTCGACATCACTCGCTGTCAAGAACTCCCCGTCTGTAGTGTTCCTTTGATGGAACGCAGGTTACAGTCGGTACTGGAGGAGAACATGGGAATCTCGAAGCTGTTCCCGGTTCAAGTCGCACTTTGGCAAGAAACGGTTGGATCAGGTGACTTTGAGCGAGACCTTTGCATAAACTCGCCCACCGAAAGTGGCAAAACCTTGGCTTATGCTCTTCCCATCGTTCAAAACTTGTCCACCAACACCAGTGACCGCCTCTTTGCTTTGGTTGTAGTTCCCACTCGTGACCTTGCTTTGCAGGTTAAGCGCGTCTTCGATGCCCTTGCATCACCGCTGGGTCTCCACATTGGCTTGGCTGCTGGTCAATCTTCGCTTCGCCACGAGCTTTCTAGCCTCATTTATCTACCTGGAGAAGACGACGGTCCAGATCCTGGTTTTTTGTCTCCTTTGTGGTTCCAAAGCAAGGTCAACATATTGGTAGCGACCCCTGGAAGGCTAATGGACCATGTCAACAAGTTGTCGTTGAAGCATCTTCGTTATCTCGTGGTTGACGAAGCAGATCGATTGCTACGCGAGGACTACCAGTCTTGGTTCAAATCTATTGTCCAAGATCCCGTGAAAGTGGTGAATAGGACGAAAGTGCGAGGTGTGGGCCGAGGAGCATGGATCTGA 714 0.5126 MEQPSVAVLPWMRHPVDITRCQELPVCSVPLMERRLQSVLEENMGISKLFPVQVALWQETVGSGDFERDLCINSPTESGKTLAYALPIVQNLSTNTSDRLFALVVVPTRDLALQVKRVFDALASPLGLHIGLAAGQSSLRHELSSLIYLPGEDDGPDPGFLSPLWFQSKVNILVATPGRLMDHVNKLSLKHLRYLVVDEADRLLREDYQSWFKSIVQDPVKVVNRTKVRGVGRGAWI* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0824 237 Gene3D - 13 228 IPR027417 -
Gso8g0824 237 SMART ultradead3 45 237 IPR014001 -
Gso8g0824 237 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 196 204 IPR000629 -
Gso8g0824 237 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 61 223 IPR014001 -
Gso8g0824 237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 217 IPR027417 -
Gso8g0824 237 PANTHER RNA HELICASE 33 219 - -
Gso8g0824 237 PANTHER ATP-DEPENDENT RNA HELICASE DDX51 33 219 - -
Gso8g0824 237 Pfam DEAD/DEAH box helicase 52 218 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0824 Gso-Chr8 7647788 7649537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0824 69 217 Eukaryotic Initiation Factors Gene Family AT3G13920 27.815 2.26e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0824 K14807 - gmx:100803202 464.922