Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0817 ATGGAGGAGGAGGATGAGATTCTTCAAGCACGGGCGTGTAAGTTGCCAAGAAGAAGAGGCAGTGATGGGGAGAGCACGAACAGCAGGTTCCACAGCAGCAGCTGGCACCACCACAACTCTTCGAGGATCATAAGGGTGTCTCGAGCATCTGGTGGCAAAGACAGGCACAGCAAGGTTATGACTTCAAAAGGGTTGAGAGATAGAAGGGTTAGGCTTTCTGTGAACACTGCCATTCAGTTCTATGACCTTCAAGATCGCTTGGGTTATGACCAACCTAGTAAAGCTGTGGAGTGGCTTATCAAATCTGCTTCTGATGCCATTTCTGAACTTCCTTCTTTGAACAATTTCCCTGACACTCCCCAAAGTGATGATCATGAGAAGAGGGAAAACACCGCTGATGTTGCTGTTGGGGTAGTAGATGGTGAGAATGGCAATGGCCAGAACTTGAGTTTGGCTAAATCTGCTTGTAGTAGCAATTCTGAGACTAGCAAAGGTTCTGGCTTGTCCCTCTCAAGGTCTGATATTCGTGTGAAGGCTAGAGAGAGGGCAAGGGAGAGAACAACAAAGGAAAAGGAGAAAGAGAAAGAGAAAAATGATGAGTCTCATCGTCATCATCACAATGTTGTTGTTGTTCCTCATCACAACCACAATGTGAACCTCGTTTCACAAACAGCTTCTTTCACGGAGCTACTCACTGGCAGTGATCCCAACAAAGGGTGTGATGAGGCTAATAACAACATGATGTTCAACAAAGCAGCAGGTAGACTGCAATGGTGTTCATCAACGACACCTATGGACTACTTTCTGGGGCTTTCCTCTTCTAGAACAACGACACACAATCACAATCACCTTCATCATCATCAATATTCTTCTTCTTCTTCTAGTGGGTTCTCATTGGCACAAATCCAACTAGGACATTCTCTTCCTGAGGCAATGAATCATGTTTCAGCATTCAACAACAATGTGAGTGGTGATAACCACAACCACTCATCATCAGATCCTCATCTGCAGCAGCAACACTTGTCATTGATACCGGATCATCTTATGTCAGCTGTGGTTACTTCTTCTGCTGCTTCTTCTCATCATCATCATCATCAGCCCAGCGGGAACGATTACAATCTGAACTCCACCATGTCTTCGGGCCTCGCTGGTTACAATAGGGGGACCCTTCAGTCCAATTCTCCGTCTCTGCTGCCTCACTCGCAGAGGTTTTCGCCTATAGACGGATCCACTGTACCTTTCTTCATTGGAGCTGCTTCTTCTGCTGCTGCAGTTGCTGCTCCTGCCATGGAGAACAACAACAACAACAACAACCATCACCAGCATCAGTTCTCTTCTGTTTTTGATGGCAGCCGCTTGCAACTTTACTATGGCCATTCTGACCAGAAGGGGAAAGCCAAGAACTGA 1407 0.4634 MEEEDEILQARACKLPRRRGSDGESTNSRFHSSSWHHHNSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVNTAIQFYDLQDRLGYDQPSKAVEWLIKSASDAISELPSLNNFPDTPQSDDHEKRENTADVAVGVVDGENGNGQNLSLAKSACSSNSETSKGSGLSLSRSDIRVKARERARERTTKEKEKEKEKNDESHRHHHNVVVVPHHNHNVNLVSQTASFTELLTGSDPNKGCDEANNNMMFNKAAGRLQWCSSTTPMDYFLGLSSSRTTTHNHNHLHHHQYSSSSSSGFSLAQIQLGHSLPEAMNHVSAFNNNVSGDNHNHSSSDPHLQQQHLSLIPDHLMSAVVTSSAASSHHHHHQPSGNDYNLNSTMSSGLAGYNRGTLQSNSPSLLPHSQRFSPIDGSTVPFFIGAASSAAAVAAPAMENNNNNNNHHQHQFSSVFDGSRLQLYYGHSDQKGKAKN* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0817 468 MobiDBLite consensus disorder prediction 10 57 - -
Gso8g0817 468 MobiDBLite consensus disorder prediction 10 25 - -
Gso8g0817 468 ProSiteProfiles TCP domain profile. 52 110 IPR017887 -
Gso8g0817 468 MobiDBLite consensus disorder prediction 383 402 - -
Gso8g0817 468 PANTHER TRANSCRIPTION FACTOR TCP24 21 468 - -
Gso8g0817 468 MobiDBLite consensus disorder prediction 174 204 - -
Gso8g0817 468 ProSiteProfiles R domain profile. 173 191 IPR017888 -
Gso8g0817 468 MobiDBLite consensus disorder prediction 317 336 - -
Gso8g0817 468 MobiDBLite consensus disorder prediction 143 170 - -
Gso8g0817 468 Pfam TCP family transcription factor 51 193 IPR017887 -
Gso8g0817 468 MobiDBLite consensus disorder prediction 353 377 - -
Gso8g0817 468 Coils Coil 177 197 - -
Gso8g0817 468 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 468 IPR005333 GO:0003700
Gso8g0817 468 MobiDBLite consensus disorder prediction 138 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0817 Gso-Chr8 7542138 7549853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0817 33 468 TCP Transcription Factor Family AT4G18390 41.845 1.01e-74 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso8g0817 TCP 7.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0817 - - gmx:100802134 776.163